Gene Avi_7016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7016 
SymbolhyuA 
ID7380214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand
Start bp14987 
End bp17008 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content60% 
IMG OID643641164 
Producthydantoin utilization protein 
Protein accessionYP_002539461 
Protein GI222102422 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.626492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACCC GAATTGGTGT CGATATCGGC GGCACCTTCA CAGACCTTGT TTACTTCGAT 
GAAGAAAATG GCAGAACGGT TGAAGGAAAA GTTCCCACCG TTCCATCAGC GCCGGAGGAA
GGTGTTGCAC ATGCGATCCG TGCTCATGTG CCCCAGGACA TTATCGACAG CGCTGCGTAT
TTCCTGCATG GAACAACAGT GGGCCTCAAT GCTCTGCTTG AGCGCCGTGG CGCCAAAGTC
GGCCTGATCA CGACACAGGG CTTCCGCGAC GTCCTTGAAA TCCGGCGCGG CGACCGCGCG
GAAATGTACA ATCTGTTCTG GAAGCAAACG GTGCCGCTCG TTCCGCGCCG CCTTCGTCTG
GAGGTCGATG GACGCATTCG GGGCGATGGC GCGGTTCTAT CCCCGGTGAC GCGAGAAAGT
GTTCTGGCGG CCTATGAACT GCTGGCGGCA GAAAAGGTCG ACAGTATTGC CGTTTGCCTG
ATCAGCGCCT TTGCCAATCC GCAGCACGAG CTCGAGATCG AAGCCATTCT TCGTGATGCG
GGGTATGAAG GCGGCATTTC GCTCTCCCAC AAGATCTCCG GAGAATACCG GGAATATGAG
CGCACGTCGA CAACGGTCAT CGACGCGTTC GTTCGCGGTC GCATGTCGAA TTATCTCAGG
CGGCTGGAAA ACACGCTGCG CAATCTCGGC TTTAAGGGGC AGTGCCTGAT TACGCGTTCC
GGCAGTGGCT CCATGACATT TTCCGAGGCG GAAGACCGAC CGTTCGAAAC GATTATGTCC
GGGCCTGTCG GCGGCGCTCA GGGGGCAGGT GAGCTTGCCA AGATGCTTGG GCGGAAGGCC
ATGATCACCG CCGATGTCGG CGGAACGAGT TTCGACACGG CCGTCATCAT CAATGGCGAA
CCCCAGGTTC TGTTTGAGGG CATGATCGAC AATATGCCGG TGCAGACCCC ATGGGTCGAC
GTGCGCTCGA TCGGTTCGGG CGGCGGGTCG CTTGCCTATG TTGATGTGGG CAACCTCATG
CGTGTAGGGC CACAAAGCGC CGGCGCCGTT CCGGGGCCTG CCTGCTACGG CAAAGGCGGC
ACCCAGCCCG CGCTCACTGA CGCTGCGGCC TACCTTGGCA TGCTCGGTCC GGGTAATCTC
GCCTCCGGCA TCCATCTCGA TATCGGCAAG GCGGAGGCTG CACTTGCCCC TGTCGCATCG
GCAATCGGAC AAGATATCGA AATGACGGCG GCGGGCGTTC TGCGCATTGC CAGCTCGGCC
ATGGCCAATG CCATGCGGGA GATTTCTCTG GACCAGGGTT TCGACCCTCG CGAGATGACG
TTGCTACCCT TTGGTGGTGC GGGACCGCTG ATGGCGACCC TGCTTGCTGA CGAGTTGAAG
ATGAACGAGA TCGTCGTGCC ACCACTCGCT GGCAATTTCT CTGCCTGGGG ACTTCTCGGG
GCGGACATGG TGCAGTCGGC AGCACGTACC CGCATCCTGG ATCTGACGGA TGACAGCCTG
AAGATCGCCA ATGAGGTGCT GGAAGGGCTG TTTGTCGCGA TCCGGTCGCG AAGCGAGCGT
TCGTTCGCCG AAGCGGTCAA TGCCGTTCGT CTCGACCTGC GCTACAAGGG GCAGGAGCAC
CGGCTGTCTA TCGTTGCCGA TAACGAGAAT GGCAGGATCT CTGAGGGCGC GGAGTCCATC
AAGACGAAGT TCCGCGCCGA ATACAGCAGG ACATTCGGCA GCACGATGAA CGACGAAATC
GAGGTGGTTT CCATTCGTGC CACGGTGCGC GTGCCCTTGC CGCGGCGGGA AATCCGCTTC
ACGCACGAGC CGGAAGCCGT TGCAGAGTTC CAGATGCTTG AGGCTTTTTC GTTCGAGAAA
GGAAAGCGCA TGTCCTTTGC GATCGTACAG CGCCAGGCGA TCGTCGGTAA GCTCTCAGGC
CCCGCCATCA TCACCGAAGG AACCTGTACG ACCTATCTGG ACGCCGATTG GACGGCGCGG
ATCGGGACTG TCGGCGAAAT CATTCTGGAA CGGAAGAATT AA
 
Protein sequence
MATRIGVDIG GTFTDLVYFD EENGRTVEGK VPTVPSAPEE GVAHAIRAHV PQDIIDSAAY 
FLHGTTVGLN ALLERRGAKV GLITTQGFRD VLEIRRGDRA EMYNLFWKQT VPLVPRRLRL
EVDGRIRGDG AVLSPVTRES VLAAYELLAA EKVDSIAVCL ISAFANPQHE LEIEAILRDA
GYEGGISLSH KISGEYREYE RTSTTVIDAF VRGRMSNYLR RLENTLRNLG FKGQCLITRS
GSGSMTFSEA EDRPFETIMS GPVGGAQGAG ELAKMLGRKA MITADVGGTS FDTAVIINGE
PQVLFEGMID NMPVQTPWVD VRSIGSGGGS LAYVDVGNLM RVGPQSAGAV PGPACYGKGG
TQPALTDAAA YLGMLGPGNL ASGIHLDIGK AEAALAPVAS AIGQDIEMTA AGVLRIASSA
MANAMREISL DQGFDPREMT LLPFGGAGPL MATLLADELK MNEIVVPPLA GNFSAWGLLG
ADMVQSAART RILDLTDDSL KIANEVLEGL FVAIRSRSER SFAEAVNAVR LDLRYKGQEH
RLSIVADNEN GRISEGAESI KTKFRAEYSR TFGSTMNDEI EVVSIRATVR VPLPRREIRF
THEPEAVAEF QMLEAFSFEK GKRMSFAIVQ RQAIVGKLSG PAIITEGTCT TYLDADWTAR
IGTVGEIILE RKN