| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7015 |
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| Symbol | |
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| ID | 7380213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 13283 |
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| End bp | 14869 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641163 |
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| Product | ABC transporter substrate binding protein (oligopeptide) |
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| Protein accession | YP_002539460 |
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| Protein GI | 222102421 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0208042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCATGA TGAGCAGAAT GTCATCGCGA TTGTTGGGAA TGACGGCTGC CGCCGCACTT
TTGGGCGCTG GTATGGCTTT TGGCGCCTCG GGCGATCTCG TCGTTAATGC GCCGACCGCA
CCATCCACCC TTGATCCAGC CTGGGCCTGT GGTGTTCCGG ATATCGGGTT TCTGCAGAAT
TTCTATGTGC GGCTGGTCGA TTTCGGCATC AAAAAGAATG CTGCGGGCAG CGAGGAAGTA
GATTACGGCG CGGTTCGGCC CTATCTGGCA AAATCTTGGA CGATCAGCGA TGATGGAAAG
ACCTATACGT TCAAGCTCAA CGACAATTAC AAGTTCACCT CCGGAAAGCC AGTCGACGCG
GCTGCTGTCA AATATTCCTT CGAGCGCGGC CTCAAGATGG GCGGCTGTGG CCAGTATTTC
CTGACCGATG GGTTCCTCAG CCCGAGCATT ATCGAATCGA TCGAAGCGCC TGACGCGACC
ACTGTCGTCA TCAAATTGAT CCAGTCCAAT GCCAATTCCC TCGCCGACTG GGCGACGGGA
GCGGCTTCGA TCGTCGATCC GACGGTCGTT GAAGCCAATG GTGGCGTCGT TGCTGGCAAG
CCGAACGAAT ACATGTCGTC GCATGTTGCT GGCTCCGGGC CATATGTGCT GGATTCCTAT
TCGCCTAACC AGTCGGCCCA TGCCACGGCC AATCCTAATT TCGGCGGCGA GCCGCCGCTG
GCGAAGTCGA TCCAGATGAA CTGGATTTCC TCCGCTCCGA CCTTGCTGCT ACAAGCCCGA
AGCGGGCAAG CGGATGTCAC CTATGGTCTC TCCAAGCAGG CGGTATCGAC GCTTAAGTCT
TCGCCGGATG TCAAGGTTGA GGCCTTTTCC AATCCCTTCG TCCAGCAGAT GATGTTGCCA
AACACAAAGG CGCCCTGGGA CAACCCGAAG GTGCGCGAGG CCGTCGCCCA TGCCGTCCCT
TACGAGGATA TCGTGAAGAA GGTCGCGTTC GGATACGGAA CGTTCTATTT CGGCCCGGTG
CCACCAAGCA TGGCCGGCTT CAATGCCGAA CTGAGCAAAC CAATCCAGTT TGATCTTGCC
AAGGCAAAGA CATTGCTGGC GGAGAGCGGT GTGAAACTGC CGGTCGACGT CGAAGTCCTC
GTTCAGGAAG GCGACACTAC GCAACAGCAG ATTGCCACCG TCTTGCAAAG CACCTGGTCG
AAGCTTGGCA TCAACCTGAA GATCCGCATT GCGCCAGGTG CCGAATATCA GGACCTGACG
CAGGGCCATA AGGTGCAGTC GCTGATGCGG CTCGATGGTC CTGGAGTCTT CGAGGCCGGT
TACTACTTCG GCTACGACGT CATGTGCAAG ACGCCCTATA ACCTGACAGA ATCCTGCAAT
CCGAAAATCG ACGAGTTGGT CGTCAAATTG CGGGCGACGT TGGACAAGGT CGAGCATCAG
AAGATCCTTG ACGAGATCAC CACGCTGTGG CGAGCAGACT ATCCGAAGCT CCTCTTCTTC
GAAGACCAGC CGGTCATTGT CTTGAGCAAC AACGTCAAGT CGTTCCGTTT CGCGCCGCTC
ACAGACTTCC GCTTCATGGG TAAGTAA
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| Protein sequence | MGMMSRMSSR LLGMTAAAAL LGAGMAFGAS GDLVVNAPTA PSTLDPAWAC GVPDIGFLQN
FYVRLVDFGI KKNAAGSEEV DYGAVRPYLA KSWTISDDGK TYTFKLNDNY KFTSGKPVDA
AAVKYSFERG LKMGGCGQYF LTDGFLSPSI IESIEAPDAT TVVIKLIQSN ANSLADWATG
AASIVDPTVV EANGGVVAGK PNEYMSSHVA GSGPYVLDSY SPNQSAHATA NPNFGGEPPL
AKSIQMNWIS SAPTLLLQAR SGQADVTYGL SKQAVSTLKS SPDVKVEAFS NPFVQQMMLP
NTKAPWDNPK VREAVAHAVP YEDIVKKVAF GYGTFYFGPV PPSMAGFNAE LSKPIQFDLA
KAKTLLAESG VKLPVDVEVL VQEGDTTQQQ IATVLQSTWS KLGINLKIRI APGAEYQDLT
QGHKVQSLMR LDGPGVFEAG YYFGYDVMCK TPYNLTESCN PKIDELVVKL RATLDKVEHQ
KILDEITTLW RADYPKLLFF EDQPVIVLSN NVKSFRFAPL TDFRFMGK
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