| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7014 |
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| Symbol | mdh |
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| ID | 7380212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 11936 |
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| End bp | 12985 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643641162 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_002539459 |
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| Protein GI | 222102420 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2055] Malate/L-lactate dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.293243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTGA AAACGAATTT CGCAGCGGGA ACCTGCCGCC TGCCGTTCGA AGCCCTTCAG
AACCTCCTCA AGCGCATTTT CCTGGCGGCT GGAGCCAGCG AGCACGTGGC GAACATCCTC
AGCGCCAATT GTGCTGGATG CGAACGCGAT GGCGCGCTTT CACATGGCAT TTTCAGAATG
CCCGGCTATG TAAGTTCCAT CCGCAGCGGT TGGGTCGATC CTGCCGCCGT GCCGGTTCTG
GAGACCGGTG GCTCGGGCTT CCTGCGGGTT GATGCCCGTA ACGGATTTAC GCAGGTCGCG
CTCGATTTTG CGGCACAGTC TTTGAAGGAG CGCGCAAGGC AGGAAGGCAT CGCGCTGCTT
TCGATCCGCA ATTCCCATCA TTTCAGCGCG CTCTGGCCGG ATGTCGTGCC CTTCGCCGAA
GAGCGGCTAC TGGCCATCGC GATGGTCAAC AGCTTTGCCT GTACCGCGCC TTTCGATGCC
AAGGTGCCGG TTTTCGGCAC CAATCCGGTT GCCTTTGCCG CGCCCTGTGA CGGCATGGTC
CCCATGGTCG TCGATATGGC CACGAGCGCC ATCGCCAATG GCGATGTGCA GATTGCCGCG
CGCGAAGGCT TCAGCCTGCC GCCTGGGCTA GGCATCGACC GGAGCGGAAA GCCAACCGTC
GATCCGCATG CGGTGCTGGA TGGCGGCGCA CTGCTGACAT TCGGCGGCTA TAAGGGCTCG
GCCATTTCGA TGCTGGTGGA AGTGATGAGC GCCGCTTTGA CCGGAGGCAA GTTTTCCTAC
GAAGTGGACT GGTCCGACTA TCCCGGGGCA CAGACGCCGC ATACGGGCCA GCTCGTTATT
CTGATCGATC CGGATGTTGG CCGCAATGCG CAATTCAGCC GCCGCGTCCG GCATCTGGTC
GAACGGCTCC GACTGGCAAA GGTCTCTCGC CTGCCAGGCG ATCGCCGGCT GGTCACACGC
GAGCGTTCGA TGCGGGAGGG CGTGTGCCTA CAAAAGAGCG ATCTGGAGAG AATGGAACTT
CTAGCGCAGC AAAGATGGGC ATCAACCTGA
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| Protein sequence | MTLKTNFAAG TCRLPFEALQ NLLKRIFLAA GASEHVANIL SANCAGCERD GALSHGIFRM
PGYVSSIRSG WVDPAAVPVL ETGGSGFLRV DARNGFTQVA LDFAAQSLKE RARQEGIALL
SIRNSHHFSA LWPDVVPFAE ERLLAIAMVN SFACTAPFDA KVPVFGTNPV AFAAPCDGMV
PMVVDMATSA IANGDVQIAA REGFSLPPGL GIDRSGKPTV DPHAVLDGGA LLTFGGYKGS
AISMLVEVMS AALTGGKFSY EVDWSDYPGA QTPHTGQLVI LIDPDVGRNA QFSRRVRHLV
ERLRLAKVSR LPGDRRLVTR ERSMREGVCL QKSDLERMEL LAQQRWAST
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