| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3318 |
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| Symbol | |
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| ID | 7315546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3462046 |
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| End bp | 3463719 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643618218 |
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| Product | protein translocase subunit YidC |
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| Protein accession | YP_002515372 |
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| Protein GI | 220936473 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAACC TTCGCCCCGT ACTCTACCTG TCGATGCTGT TGGTGCTGTT CCTGATCTGG
CAGGCCTGGA ACCGCGATTA CGGCCCCCAG CCGGTGGCCG CCCCCGGTGC CCAGGAACAG
GTGATGGACC GCGATGGTGT CCCGGCCCCG CCCCAGGACG TACCCGATGC GCCGGTCTCC
GAGGCCGTGG ACGCGCCCAC CGAAGTCGCG CCGGCGGAGC CGGACCGCCG CCGTATCCGG
GTGGTGACCG ACGTGCTGGA TATCGAAATC GACACCCGCG GCGGCGACCT GGTGCGGGCC
GACCTGCCCA CCTACCCGGT GAGCCTGCGC ACCCCGGACC AGCCGATTCG CCTGCTGGAT
GAGCGTTTCC GCCAGTACGT GGCCCAGTCG GGCCTGATCC ACGACCGGGT GCCCGGGGTC
TCCGGCGAGG GCCGCGCGCC CAGCCACCAC GCCATATTCC AGGCAGAACG TGACGAGTTC
CGCCTGGCCG ATGGCCAGGA CGAGCTGCGC GTGCCCCTGA CCTGGACCAG CGAGGACGGC
GTGCAGGTCA CCAAGACCTA CACCTTCCGT CGCGGTGACT TCCTCATCAA CGTGGACCAC
GCGGTGCGCA ACAACAGCGA CCAGCCCTGG GTGGGTCGCC AGTACCGGCA GATCCGCCAC
GGCAGCACCC CGAGCCGTGA ATCCTGGTTC CTGTACACCT TCACCGGCGT GGCCTATCAC
GACGGGCGCT ACGAGAAGCT GTCCCTGGAG GACATGGCCG GCAAGCCCCT GGACAAGGAC
GTGCAAGGCG GCTGGATCTC CATCATCCAG CACTACTTCC TGACCGCCTG GGTGCCCTTC
GAGCACGAGA TCAACCAGTT CTACACCCGG GTGCTGGGCA CGCCGGCACG CCCCGAGCAC
ATCATCGGCA TGCGTTCCGA GGCACAGACC GCCGCCCCGG GCGAGGAAAC GGTGTTCACC
AGCCGCTTCT GGGTGGGCCC CAAGGAGCAG GCGGCATTGA AGGCCATCCA GCCAGGCCTG
GAACTGACCG TGGACTACGG CATGCTGTCC TTCCTGGCCA AGCCGCTGTT CTGGGTGCTC
GACTGGATCC ACAACGTGGT GGGCAACTGG GGCTGGGCCA TCATCATCCT GACCATCCTC
ATCAAGCTGG TGTTCTACAA GCTCTCCGAG ACCAGCTACC GCTCCATGGC CAAGATGCGC
GCCGTGCAGC CCAAGATGAT GCAGCTCAAG GACCGCTACG GCGACGACAA GCAGCGCATG
AACCAGGCGC TCATGGAGCT GTACAAGAAG GAGAAGATCA ACCCGCTGGG CGGCTGCCTG
CCGATCCTGG TGCAGATCCC GGTGTTCATC GCCCTGTACT GGGTGCTGCT GGAGAGCGTG
GAGATGCGCC AGGCGCCGTG GATCCTGTGG ATCCAGGACC TCTCCGTGCG CGACCCCTAC
TTCATCCTGC CCATCCTCAT GGGCGTGACC ATGATCGCCC AGTACAAGCT CAACCCGGCG
CCCATGGACC CGATCCAGCA GAAGCTGATG ATGGCCCTGC CGTTCGTGTT CACCGTGTTC
TTCGCCTTCT TCCCGGCGGG CCTGGTGCTG TACTGGTTCG TGAACAACCT GCTGTCCATC
GCCCAGCAGT GGTACATCAC CCGCAACATC GAGAAGGCCG GCAAGAAGGG CTGA
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| Protein sequence | MDNLRPVLYL SMLLVLFLIW QAWNRDYGPQ PVAAPGAQEQ VMDRDGVPAP PQDVPDAPVS
EAVDAPTEVA PAEPDRRRIR VVTDVLDIEI DTRGGDLVRA DLPTYPVSLR TPDQPIRLLD
ERFRQYVAQS GLIHDRVPGV SGEGRAPSHH AIFQAERDEF RLADGQDELR VPLTWTSEDG
VQVTKTYTFR RGDFLINVDH AVRNNSDQPW VGRQYRQIRH GSTPSRESWF LYTFTGVAYH
DGRYEKLSLE DMAGKPLDKD VQGGWISIIQ HYFLTAWVPF EHEINQFYTR VLGTPARPEH
IIGMRSEAQT AAPGEETVFT SRFWVGPKEQ AALKAIQPGL ELTVDYGMLS FLAKPLFWVL
DWIHNVVGNW GWAIIILTIL IKLVFYKLSE TSYRSMAKMR AVQPKMMQLK DRYGDDKQRM
NQALMELYKK EKINPLGGCL PILVQIPVFI ALYWVLLESV EMRQAPWILW IQDLSVRDPY
FILPILMGVT MIAQYKLNPA PMDPIQQKLM MALPFVFTVF FAFFPAGLVL YWFVNNLLSI
AQQWYITRNI EKAGKKG
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