| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3307 |
|---|
| Symbol | |
|---|
| ID | 7315535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 3451808 |
|---|
| End bp | 3453349 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643618207 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | YP_002515361 |
|---|
| Protein GI | 220936462 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.48962 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTCA ATCCGACCGA AATCAGTGAA CTGATCAAGA AGCGCATCGC CAGTTACGAT
GCGGCGGCAC AGGCGCGCAC CGAAGGTACC GTGGTGAGCC TCTCCGACGG CATCGTGCGT
CTGCACGGCC TGGCCGACGT GATGCAGGGT GAGATGATCG AATTCCCCGG CAACACCTAC
GGCCTGGCGC TCAACCTGGA GCGCGACTCC GTGGGCGCGG TGGTGCTGGG TGACTACAAG
CACATCAAGG AAGGCGACAC GGCGCGCTGC ACCGGCCGCA TCCTGGAAGT GCCCGTGGGC
GAGGCCCTGC TGGGCCGCGT GGTGAACTCC TTGGGCATGG CGGTGGACGG CAAGGGTGCC
ATCGACACCA GCCTGACTTC CCCCATCGAG AAGATCGCCC CCGGCGTGAT CGAGCGTCAG
TCGGTGGACC AGCCGGTACA GACCGGTCTG AAGGCCATCG ACGCCATGGT GCCGATCGGC
CGCGGCCAGC GTGAGCTGAT CATCGGCGAC CGCCAGACCG GCAAGACCGC CGTGGCCGTG
GACGCCATCA TCAACCAGAA GGGCACCGGC GTGAAGTGCA TCTACGTGGC GGTGGGCCAG
AAGGCCTCCT CCATCGCCAA CGTGGTGACC AAGCTGGAAC AGCACGGCGC GCTGGAGCAC
ACCATCATCG TGGCGGCCAC CGCCTCCGAA TCCGCGGCCA TGCAGTTCAT CGCCCCCTAC
GCCGGTTGTG CCATGGGCGA GTACTTCCGT GACCGCGGCC AGGACGCGCT GATCATCTAT
GACGACCTCA CCAAGCAGGC CTGGGCCTAC CGCCAGGTGT CCCTGCTGCT GCGTCGTCCC
CCGGGTCGTG AAGCCTATCC CGGTGACGTG TTCTACCTGC ACTCCCGTCT GCTGGAGCGC
GCCTCCCGCG TGAACGCCGA GTACGTGGAG AAGTTCACCA ACGGTGAAGT GAAGGGCAAG
ACCGGTTCCC TGACCGCCCT GCCGATCATC GAGACCCAGG CCGGCGACGT GTCCGCGTTC
GTGCCCACCA ACGTGATCTC CATCACCGAT GGTCAGATCT TCCTGGAGAC CGACCTGTTC
AACGCGGGTA TCCGTCCGGC CATCAACGCC GGTCTGTCCG TTTCCCGAGT GGGTGGCGCG
GCCCAGACCA AGATCATCAA GAAGCTCGGC GGCGGCGTGC GTCTGGCCCT GGCCCAGTAT
CGTGAGCTGG CGGCGTTCTC CCAGTTCGCC TCCGACCTGG ATGAGCTGAC CCGCAAGCAG
CTGGAGCGCG GCAAGCGCGT CACCGAGCTG ATGAAGCAGG GCCAGTTCTC GCCCATGTCC
GTGGCCGAGA TGGCGTTCTC CCTGTTCGCC GCCAACGAAG GCTACCTGGA CGACGTGGAT
GCCAAGAAGG TGGTGGACTT CGAAAAGGCC ATGCTCGACT TCCTGCGTTC CAGCAAGACG
GACCTGCTGG CCAAGATCAA CGAGAAGGGT GACTACAACG ACGACATCCA GGCCGGCATG
AAGGCCGCCC TGGACGAGTT CAAAGCCAAG CACAGCTGGT AA
|
|---|
| Protein sequence | MQLNPTEISE LIKKRIASYD AAAQARTEGT VVSLSDGIVR LHGLADVMQG EMIEFPGNTY
GLALNLERDS VGAVVLGDYK HIKEGDTARC TGRILEVPVG EALLGRVVNS LGMAVDGKGA
IDTSLTSPIE KIAPGVIERQ SVDQPVQTGL KAIDAMVPIG RGQRELIIGD RQTGKTAVAV
DAIINQKGTG VKCIYVAVGQ KASSIANVVT KLEQHGALEH TIIVAATASE SAAMQFIAPY
AGCAMGEYFR DRGQDALIIY DDLTKQAWAY RQVSLLLRRP PGREAYPGDV FYLHSRLLER
ASRVNAEYVE KFTNGEVKGK TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETDLF
NAGIRPAINA GLSVSRVGGA AQTKIIKKLG GGVRLALAQY RELAAFSQFA SDLDELTRKQ
LERGKRVTEL MKQGQFSPMS VAEMAFSLFA ANEGYLDDVD AKKVVDFEKA MLDFLRSSKT
DLLAKINEKG DYNDDIQAGM KAALDEFKAK HSW
|
|---|
| |