| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3302 |
|---|
| Symbol | |
|---|
| ID | 7315530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 3445425 |
|---|
| End bp | 3447251 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643618202 |
|---|
| Product | D-fructose-6-phosphate amidotransferase |
|---|
| Protein accession | YP_002515356 |
|---|
| Protein GI | 220936457 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGAA TTGTCGGAGC CATCGCTGAA CGCAACGTCG TCCCTATCCT GATGGAGGGC
CTGCGACGAT TGGAGTATCG CGGCTACGAC TCCGCCGGCA TCGCCGTGCG TGCGGACGAT
GGCCACATAC AGCGCATCCG CTCCGTGGGC AAGGTGGGTG AGCTCCAGCA CCGTCTGGAT
ACACAGCCCC TGGTGGGCCG ACTGGGCATC GCCCACACCC GCTGGGCCAC CCACGGCATC
CCCGCCGAGC GCAACGCCCA TCCTCACATG AGCGGTGAGC GGGTCGCGGT GGTACACAAC
GGCATCATCG AGAACCACGC GGACCTGCGG GCCGAGCTGA GCGCGCAAGG TTTCAGCTTC
ACCTCCGAGA CCGACACCGA GGTGATCGCC CACCTGCTCG CCTATCACCT GGGTGAAGGT
GAGGACCTGC TCAGCGCGGT CAGGTCGTCT ACCAGCCGCA TGGTGGGCGC CTATGCGCTG
GCCGTCGCAT GCCCCGACGA GGCTGAGCGG CTGATCGTCG CGCGCCTGGG CAGCCCGCTG
GTGATCGGCA TCGGCGTGGA GGAAAACTTC ATCGCCTCCG ATGTCTTCGC CCTGCTGCCG
GTGACCCAGC GGTTCATCTT CCTGGAGGAA GGCGACATCG CCGAGATCCG CAGGGGTTCG
GTGCGGGTGC TGGACGCCCA GGGCAATGAG GTCGAGCGCC CGGTGCGCAT CTCCCAGCTC
ACGGCCTCCA CCGCAGACAA GGGCCCCTAC CGGCATTACA TGCTCAAGGA GATCTTCGAG
CAGCCCGCCG TGATCGCCGA GACCCTGGAG GGGCGGATCT ACAAGGGGAG GTTGCTGGAG
GAGAGTTTCG GCCACGAGGC CAAGCGCCTG CTGGATGCCG CGAAAGGCGT GCACATCATC
GCCTGCGGCA CCAGCTACCA CGCCGGCCTG GTGGCCCGAT ACTGGCTGGA GGAGGTGGGC
GTGCCCTGCA GCGTGGAAGT GGCCAGCGAG TTCCGCTACC GCCAGGTGGT GGTGCCGAAA
GACACCCTGT TCGTCACCAT CTCCCAGTCC GGTGAGACCG CAGACACGCT GGCCGCCCTG
CGCGAGTCAA AGAAGATGGG ATATCTCGGC AGCCTGTGCG TCTGCAACGT GCCCGAGAGT
TCACTGGTGC GCGAGTCCGA CGTGGCCGTG ATGACCCGTG CCGGCCCCGA GATCGGCGTG
GCCTCCACCA AGGCCTTCAC CACCCAGCTG GTGGCACTGC GTCTGCTGGC CCTGGCCCTG
GCGCGACGCC ATGGCATGGA CCGGGAAAAG GAAAAGACCC TGGTGGAGGA ACTGGAGTCG
CTGCCCCGCC AGGTGGAAGT GGCCCTGTCC CTGAGCGAGG CCATCGAAGA GATGGCCAAC
GCCTTCGCCG AGAAGACCCA TGCCTTGTTC CTGGGCCGGG GCACCTTCTA TCCCGTGGCC
ATGGAGGGGG CGCTGAAGCT CAAGGAGATC TCCTACATCC ACGCCGAGGC CTATCCCGCC
GGAGAACTCA AGCACGGCCC GCTGGCCCTG GTGGACGCGG ACATGCCCGT GATCTGCGCC
CTGCCCAACG ACCCGTTGCT GGAGAAGGTG CTCTCCAACC TGCAGGAAGT CCGCGCCCGC
GGTGGTGAGC TGTTCCTGTT CAGCGACGAG CGCATCAGGA TCAACCTGGA CCACTACCAC
AGCCTGACCC TGGCCGACAT CTGCCCCAGC ACCGCGCCCA TCGTCTACAC CATCCCGCTG
CAGCTGCTGG CGTATCACAC GGCCGTCCTC AAGGGGACGG ATGTGGATCA GCCGAGGAAT
CTGGCGAAGT CGGTGACGGT GGAATGA
|
|---|
| Protein sequence | MCGIVGAIAE RNVVPILMEG LRRLEYRGYD SAGIAVRADD GHIQRIRSVG KVGELQHRLD
TQPLVGRLGI AHTRWATHGI PAERNAHPHM SGERVAVVHN GIIENHADLR AELSAQGFSF
TSETDTEVIA HLLAYHLGEG EDLLSAVRSS TSRMVGAYAL AVACPDEAER LIVARLGSPL
VIGIGVEENF IASDVFALLP VTQRFIFLEE GDIAEIRRGS VRVLDAQGNE VERPVRISQL
TASTADKGPY RHYMLKEIFE QPAVIAETLE GRIYKGRLLE ESFGHEAKRL LDAAKGVHII
ACGTSYHAGL VARYWLEEVG VPCSVEVASE FRYRQVVVPK DTLFVTISQS GETADTLAAL
RESKKMGYLG SLCVCNVPES SLVRESDVAV MTRAGPEIGV ASTKAFTTQL VALRLLALAL
ARRHGMDREK EKTLVEELES LPRQVEVALS LSEAIEEMAN AFAEKTHALF LGRGTFYPVA
MEGALKLKEI SYIHAEAYPA GELKHGPLAL VDADMPVICA LPNDPLLEKV LSNLQEVRAR
GGELFLFSDE RIRINLDHYH SLTLADICPS TAPIVYTIPL QLLAYHTAVL KGTDVDQPRN
LAKSVTVE
|
|---|
| |