Gene Tgr7_3290 details

Gene Information

• Locus tag: Tgr7_3290
• ID: 7315518
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 3439524
• End bp: 3440078
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643618190
• Product: DJ-1 family protein
• Protein accession: YP_002515344
• Protein GI: 220936445
• COG category: [R] General function prediction only
• COG ID: [COG0693] Putative intracellular protease/amidase
• TIGRFAM ID: [TIGR01383] DJ-1 family protein

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGCA TCCTTATCCC CCTCGCCAAC GGCTGCGAGG AACTCGAAGC CGTCACCCTG 
ATCGACCTGT TCCGCCGTGC CGGCTTCCAG GTCATCACCG CGGGCCTGGA ACCGGGCCCG 
GTGCGCTGCT CCCGCGGCAC CACGATCCTG CCCGACCAGA CCCTGGACGA GGCCAGGGAC 
GGCCGCTACG ACCTCATGGT CCTGCCCGGC GGCCAGCCCG GCGCCGACCA CCTCAACGCC 
GACCCGCGCA TCCACGCCCT GCTGAAGAAA CTGGCCGCCG AGGGCCGCTA CGTGGGCGCC 
ATCTGCGCCG CCCCCAAGGT GCTGGCGGAC GCCGGCCTGC TCAAGGGCAA GCTGGCCACC 
GCCTTCCCCG GCGTGCTGGA GGCCATGGAC CTGGGATCGG ACACGAAGCT GACCGCCGCC 
GCCGTGCAAC GCGACGGCAA CGTGATCACC TCCAAGGGAC CCGGCACGGC CATGGACTTC 
GCCCTGGACC TGATCGAACT GCTCGCCGGC CCGGACAAAC GCCGCCAGGT GGAAGCGCCT 
CTGCAAAGGC CCTGA 

 

Protein sequence

MASILIPLAN GCEELEAVTL IDLFRRAGFQ VITAGLEPGP VRCSRGTTIL PDQTLDEARD 
GRYDLMVLPG GQPGADHLNA DPRIHALLKK LAAEGRYVGA ICAAPKVLAD AGLLKGKLAT 
AFPGVLEAMD LGSDTKLTAA AVQRDGNVIT SKGPGTAMDF ALDLIELLAG PDKRRQVEAP 
LQRP