Gene Tgr7_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_3253 
Symbol 
ID7315628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp3402235 
End bp3402906 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content64% 
IMG OID643618154 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_002515308 
Protein GI220936409 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGTT TCGATCTCTC CACGCCGGCC GCGCGCCGCC GGGTCTATGC CCGGGCGTTG 
TGGGCGGACG ATGGTTGGGT GCGGGAGTTC GGTCTGAACA ACTTCCACCG CATCAGCGAG 
CGCGCCTTCC GCTCGGGCCA GCCCTCACCT CGGCATCTCA GCCTTCGTAT CCCGCGCCAC 
GGAATCCGCA CCGTCATAAA CCTGCGTGGC GAGGAGCCGG ACAATCCCAT GCTGGCCCTG 
GAGGCGGACG CCTGCGAGCG CCTGGGTGTG CGGCTGGAAC ACCTGCGTAC CTATTCCCGG 
GATCTGCCCA CCCGGGAGGT CATCCACCAG GCCCATGAAC TGTTGCAGCG CATCGAGTAT 
CCGGTGTGGT TTCACTGCAA GTCCGGCGCC GACCGGGCCG GACTGATGGC GACCCTGTAC 
CTGCACTGGA TCGAGGGCGT TCCCCTGGAG CAGACCCGGC AATTGAAGCT CTGGCCCTAT 
TTCCATTACC GCTATGCCAA GACCGGCCTG CTGGACTACT TCTTCGAGAC CTACCTGAAG 
GACACCGCCG AGCGGCCCAT GAGTCTCCTG GAGTGGGTGG ATACCCGTTA CGATCCGAAG 
CGATTGAAGC GCGCCTTCAA GCCCGTGCCC GTGATGGATG CCCTGGTGGA CAGGCTGTTA 
AGGCGGGAAT GA
 
Protein sequence
MSGFDLSTPA ARRRVYARAL WADDGWVREF GLNNFHRISE RAFRSGQPSP RHLSLRIPRH 
GIRTVINLRG EEPDNPMLAL EADACERLGV RLEHLRTYSR DLPTREVIHQ AHELLQRIEY 
PVWFHCKSGA DRAGLMATLY LHWIEGVPLE QTRQLKLWPY FHYRYAKTGL LDYFFETYLK 
DTAERPMSLL EWVDTRYDPK RLKRAFKPVP VMDALVDRLL RRE