| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3246 |
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| Symbol | |
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| ID | 7315621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 3393824 |
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| End bp | 3396904 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643618147 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_002515301 |
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| Protein GI | 220936402 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGACAC GCCTGATCCA GTTCGCCCTC ACCCAACGCC TGTTCGTGCT GCTTGCCGTC
GCCCTGCTCA TCGGCCTGGG CATACTCGCC CTTACGCGGT TGCCGATCGA CGCCTTTCCG
GACGTTTCCT CGCCGCAGGT CAAGCTCATC ATCAAAGCAC CCGGCATGAC ACCCGAAGAG
GTCGAGGCAC GCATCACCGC GCCGGTAGAG GTGGAAATGC TCGGCATCCC GAACCAGGTG
ATGCTGAGAT CCGTGGCCAA GTACGGCCTC ACCGACATCA CCGTCGACTT CGCCGAGGGG
ACCGACATCT TCTGGGCACG CCAGCAGGTG GCCGAGCGCC TGGCCGGTCT CTGGGGCGAT
CTGCCGCCAG ATGTCTCCGG CGGCATGGCG CCCCTGACCA CCCCCCTGGG CGAGATGTTC
ATGTTCACTG TCGAGGGCGG AGATCTCACG CTCGCCGAGC GCCGCGCCCT GCTCGACTGG
GTGATCCGGC CCGCCCTGCG TACGGTACCC GGCGTAGCCG ACGTGAATGC GCTCGGCGGC
TACGTGCAGA CCTTCGAAGT GAGCCCCGAC CCACTGCGCA TGAGCGCGCG TGGCGTCACG
CTGGACGAAC TGATCCAGGC ACTCCAGCTC AACAACCGCA ATGACGGCGC AGGCCGCCTC
ATCGACGGCG AGGAGACACT TCTGGTGCGC GCCGAGGGCA GCGTGCGCAA TCTGGAGGAT
CTGGGCAGCC TGCTCGTGGC CTGGCATCGG GGCATGCCGG TACATGTACA CGACGTGGCA
ACGGTGCGTA TGGGCGCGCT CACCCGCTAT GGGGCGGTCA CCAGGAACGG GGTGGGCGAG
ACGGTCCAGG GCCTGGTGCT GGGGCTGCGT GGCGCCAACG CACGCGAGGT GGTGGAGGGG
GTGAAGGCAC GGCTCGCCGA ACTCGCGCCG ACCTTGCCCG AGGGCGTTCA TCTGGAGGTC
TTCTATGACC GGGGCAACCT GGTGGACCGG GCGGTACACA CCGTATCCAA AGCCCTGGTG
GAAGCCATTG TGCTGGTACT GATCCTGCTG GTGCTGTTCC TCGGCGACCT GCGGGCGGCG
TTGACCGTGG CGCTCATCCT GCCTCTCGCC GCACTGCTTA CCTTCATCCT CATGGACAGC
TTCGGTCTAT CGGCCAACCT GATGAGCCTG GGTGGCCTGG CCATCGCCAT CGGTATGCTG
GTGGATGCCG CGGTGGTGGT GGTGGAAAAC ATCGTCTCGC AGCTCGCCCG AGCCGGGCAC
ACGCAGCGTC TGCCGCGCCT GCACGTCATC CATCGCGCCG TGCGCGAGGT GGCTGCCCCG
GTGACCGCAG GCATCCTGAT CATCATCATT GTGTTCCTGC CGCTGCTCAC CCTGGAAGGG
CTGGAGGGCA AGCTGTTCAT CCCGGTGGCC CTCACCATCG TGTTCGCGCT CGCCGGCTCG
CTGCTGCTCT CGCTGACCGC CATCCCGGTG CTCGCCTCCT ACGTGCTGCG CCGGGTGGGA
CACACTGAAC CCTGGCTGGT GCGCAGGCTT GACGCCGGCT ACCGGCCGAT GCTGGCCTGG
AGCATGGCGC ACCCGCGCAC CGTGGCCGGG ACGGCACTCG TGGCCCTGTT GCTCGCGGGC
GGACTCTACA CGCAGATCGG CAAGACCTTC ATGCCGACCA TGGACGAGGG CAACCTCATC
GTCCAGCTGG AGAAACTCCC GTCCATCTCC CTGCCTGCTT CGATCGAACT CGACCAGCGC
GTACAGCGTG CCCTGCTCGA GCAGGTCACG GAGGTGATCG GTGTCGTCGC ACGTGCCGGC
TCCGATGAGC TGGGCCTGGA CCCCATGGGT CTGAACGAGA CAGACAGCTT CCTGGTGCTC
AGGCCCCGCA GCGAGTGGCG CTTCGACAGC CCCGAGCAAC TTCAGGACGC CATCCGTGCG
GTGCTCGCCG AGTTCCCCGG GGTGGGATAC GCCTTCACCC AACCCATCGA GATGCGCGTT
TCGGAGATGC TCACCGGTGT GCGCGGCGAT CTGGCCATCA AGCTGTTCGG CCCGGACCTG
GACGTCCTCA ACACCAAGGC CGAGGAGATC GCGGCAGCGG TACGCACCAT CCCCGGCGCC
GAGGACGTTT ACTTCTCGGT CAACGAGGGC GTGCAGTACC TGAACCTCGC CGTGGACCGC
GAGGCAGCTG CACGCCTCGG TCTCTCGGTG GATGCCTTGC AGACGCTGCT GCGCGCCCAG
GTGGAGGGCA AGCCCGTGGG CACGGTCTAT GAGGGCATGC GCCGCACGCC ACTGGTGATT
CGTGGCGAGA GCGCGATGGA CTCGCCCCAG GCGTTTCGTG AAATGCTGGT GAGCCTGCCG
GACGGTGGCC AGGTACCGCT CTCGAGCCTG GCCCGCATCG AGCGCGTAGA GGGGCCTGTG
TCAGTCAAGC GCGAGCTCGG TGAGCGCAAC GTGGTGGTGA TCGCCAACGT ACGCGGACGC
GACCTGGTCG GCTTCGTGGA GGCCGCACGG CTGGCAGTGA ACGAAGCGGT TCCCCTGGAG
CCGGGCTACC GGTTGGCCTG GGGCGGGCAA TTCGAGAATC AGCAGCGCGC CGCCGAGCGT
CTGGGCCTCG TCGTGCCGGT GGCCATCGGC CTGATCTTCC TGCTCCTGTT CTCCACCTTC
GGTTCAGTGC GTCAGGCCGC GCTGGTGTTG CTCAACATCC CCTTCGCACT CATCGGCGGC
GTTGTGGGTC TGTGGCTCTC GGGTGAGTAC CTGTCCGTGC CGGCCTCGGT GGGCTTTATC
GCCCTGCTCG GTATCGCCGT GCTCAACGGC GTGGTGATGG TCAGCTACTT CAACCAGTTG
CGCGCCCGGG GCATGGGCCT CGATCAGGCC GTCATCGAAG GGGCACGTCG GCGTCTGCGG
CCCGTCATGA TGACCGCCTC CATTGCGGCC TTCGGTCTGG TGCCCCTGTT GTTCGCGACC
GGCCCGGGTT CGGAGATCCA GCGGCCCCTC GCCGTGGTGG TGATCGGCGG CCTGGCGACG
TCCACCCTGC TCACTCTGGT GCTCATGCCC ATCCTGTACC GGCGCTTCGG CGCACCGCAT
CCCCGAGAGG CGCTGTCATG A
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| Protein sequence | MLTRLIQFAL TQRLFVLLAV ALLIGLGILA LTRLPIDAFP DVSSPQVKLI IKAPGMTPEE
VEARITAPVE VEMLGIPNQV MLRSVAKYGL TDITVDFAEG TDIFWARQQV AERLAGLWGD
LPPDVSGGMA PLTTPLGEMF MFTVEGGDLT LAERRALLDW VIRPALRTVP GVADVNALGG
YVQTFEVSPD PLRMSARGVT LDELIQALQL NNRNDGAGRL IDGEETLLVR AEGSVRNLED
LGSLLVAWHR GMPVHVHDVA TVRMGALTRY GAVTRNGVGE TVQGLVLGLR GANAREVVEG
VKARLAELAP TLPEGVHLEV FYDRGNLVDR AVHTVSKALV EAIVLVLILL VLFLGDLRAA
LTVALILPLA ALLTFILMDS FGLSANLMSL GGLAIAIGML VDAAVVVVEN IVSQLARAGH
TQRLPRLHVI HRAVREVAAP VTAGILIIII VFLPLLTLEG LEGKLFIPVA LTIVFALAGS
LLLSLTAIPV LASYVLRRVG HTEPWLVRRL DAGYRPMLAW SMAHPRTVAG TALVALLLAG
GLYTQIGKTF MPTMDEGNLI VQLEKLPSIS LPASIELDQR VQRALLEQVT EVIGVVARAG
SDELGLDPMG LNETDSFLVL RPRSEWRFDS PEQLQDAIRA VLAEFPGVGY AFTQPIEMRV
SEMLTGVRGD LAIKLFGPDL DVLNTKAEEI AAAVRTIPGA EDVYFSVNEG VQYLNLAVDR
EAAARLGLSV DALQTLLRAQ VEGKPVGTVY EGMRRTPLVI RGESAMDSPQ AFREMLVSLP
DGGQVPLSSL ARIERVEGPV SVKRELGERN VVVIANVRGR DLVGFVEAAR LAVNEAVPLE
PGYRLAWGGQ FENQQRAAER LGLVVPVAIG LIFLLLFSTF GSVRQAALVL LNIPFALIGG
VVGLWLSGEY LSVPASVGFI ALLGIAVLNG VVMVSYFNQL RARGMGLDQA VIEGARRRLR
PVMMTASIAA FGLVPLLFAT GPGSEIQRPL AVVVIGGLAT STLLTLVLMP ILYRRFGAPH
PREALS
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