| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3245 |
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| Symbol | |
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| ID | 7315620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 3392668 |
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| End bp | 3393786 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643618146 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002515300 |
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| Protein GI | 220936401 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACA GTCATGTCAA CGGAACACGC GGCCTGTACG CGCTGCTGAT CCTGTCTGCT
TTGTTTGCCG TCAAAGGGGC CTGGGCCAGC GAGGAGCTGA TATTCACCGA AGCCCAGATC
AGCGCCCTGG GCATCGAGGT GGTGAACCCC GCCATCGCCG ACGTCGCACC GGGCCCGAGC
TATCCGGCCC GTGTTGAGCT CCCCCCCGGC CAAGAACATG TGGTGACGGC CGGCGAGGGT
GGTGTTGTCG AGGCGGTTCT GGCCTCAGAG GGCCAGACGG TGGCGGCAGG TGAACCCCTG
CTTCGGCTGC GCAGCGCCGG CATCGCGGCA CTGGAGCGCG AGTACCTGCA GGCCCGCGAG
CAAGCCGCGC TCGCCCGTCA GCAGACCGAA CGGGACGAGG CACTGTACCG TGAGGGGATC
ATCCCGGAGC GCCGGGTTCA GGAGAGCCGT TCGGCACTGG CCCAGGCCCA TACCCTGAGC
CAAGGCGCGC GCCAGGCCCT GGAAGCCGCG GGACTCGACG CAAAGGATCT GCACACCCTG
GAACAGACTG GTCGTGTCTC GAGCACCCAG ATACTGCGCG CACCCTTCAC CGCCACGGTG
CTTGAGGTCA TGGTACGCAA CGGCGAGCAG GCCGATCCTT CGACCCCGCT CCTGCGACTT
GGCCAGACCA GTACTTTGTG GCTCGAGATC CGTGTCCCCG TGGAGGACCT GGCAGGCCTG
TCGGTAGGCG CAGGGGTGCA GGTGTTGCAC GCCACCGTCC TCGGACGCGT GATTCTTATC
GGCCAACAGG TCGAACCGGC TGACCAGAGT GTCGCGGTAC GTGCCGAGAT ACACACCGGC
GCCGAATCCC TGCGACCCGG TCAGCTGCTA CAGGTCAGCC TGCTCGAGCC GAGCGGTGCC
CATGCGTTCC GTCTGCCCGC CAGCGCCGTT GTGCATCGTG GCGAGGGGCA ATATGTGTTT
GTGCAGAGCC CTCAGGGATT TCGCGTCGAA CCTGTCCGGG TGCTCAGCAC CAGCACTGGC
GACGTGGTCG TGAACGGCAC GCTCTCAACT GACGACCGGG TTGCCGTCAA GGGCATTGCT
GCCCTCAAGG GTGCCTGGCT GGGCATTGGC GGAGAGTGA
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| Protein sequence | MNHSHVNGTR GLYALLILSA LFAVKGAWAS EELIFTEAQI SALGIEVVNP AIADVAPGPS
YPARVELPPG QEHVVTAGEG GVVEAVLASE GQTVAAGEPL LRLRSAGIAA LEREYLQARE
QAALARQQTE RDEALYREGI IPERRVQESR SALAQAHTLS QGARQALEAA GLDAKDLHTL
EQTGRVSSTQ ILRAPFTATV LEVMVRNGEQ ADPSTPLLRL GQTSTLWLEI RVPVEDLAGL
SVGAGVQVLH ATVLGRVILI GQQVEPADQS VAVRAEIHTG AESLRPGQLL QVSLLEPSGA
HAFRLPASAV VHRGEGQYVF VQSPQGFRVE PVRVLSTSTG DVVVNGTLST DDRVAVKGIA
ALKGAWLGIG GE
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