Gene Tgr7_3242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_3242 
Symbol 
ID7315617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp3388671 
End bp3389786 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content71% 
IMG OID643618143 
Productdomain of unknown function DUF1745 
Protein accessionYP_002515297 
Protein GI220936398 
COG category[S] Function unknown 
COG ID[COG4398] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0186777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCTT TCTCCATGGC CGCCGCCGAA GGCATCGAAC CCGTCGCCGT GGCCCGCGAA 
CTCGCCGCCC GGCTGACCAC CCCCGCCGAG GGCGAGGCCC TGGGCTTCCT GTACGTGAGC
GATGCCCTGG CCCGGCGCCT GCCCGAACTG CTCGCGACCC TGCGCGAGGC CACCGGCGTG
ACCCACTGGA CCGGCACGGT GGGCATCGCC CTGTGCTGCA CCGGGCGGGA GATCTACGAC
CGCCCCGCGG CCGTGGCCAT GCTGGGCAGC TTCCCGGCGG GCAGCGCGCG TGTTCTGCCG
CCCATGACCG AGAACGACGA CGCCCTCACC GCACTGCTGG CGGACTGGGA CACACAGGAC
CCGGCGCGCT TCGCCCTGCT CCACGGCGAC CCCACCCACG GCACCACACC GGCGATCATC
CGCCACCTGG GCGAGCACAC CCAGATCTTC GGCGTGGGCG GCATCGCATC CTCCCAGGGC
GACTACCTGT CCGTGGCCGA CGAGGTGGTC CAGGGCGCGG TCTCCGGGGT GCTGTTCGCC
GAGTCCGTGC CCGTAGCCAC GGCCCACACC CAGGGCTGCA CGCCCATCGG CCCCGTGCAC
CGTATCACCG CCGCCAGCAA CAACGTGCTC ATCCAGCTGG ACGGACGCCC GGCCCTGGAC
GTCTTCGAGG AAGACATCGG TGAGGTACTG GCCCGTGACC TGCAGCGGGC GGGCGGCTTC
ATCGTCGCCG GCCTGCCGGT GCCCGGTTCC GACACCCGCG ACTACCTGGT GCGCAACCTG
GTGGCCGTGG ACACCGGCCA GCGCCTGGTG GCCATCGGCG AGCACGTGCG CGAGGGCGAC
GAGATCCTGT TCTGCCGGCG CGACGGCAAC GCCGCCCTGG AAGACCTCAA ACGCATGCTC
GCCGACCTCA AGCGCCGCGC CCCCAACGGC GCCCGCGGCG CGGTCTACGT CTCGTGTCTC
GGCCGTGGCC GGCACCAGTT CGGCGACGAC TCACAAGAAC TGCGCATCAT CGCCGAGGAA
CTGGGCGACA TCCCCCTGGT CGGATTCTTC GCCAACGGCG AGATCTTCCA CAATCGGCTG
TATGGCTATA CAGGCGTGCT GACGTTGTTC CTCTAA
 
Protein sequence
MTPFSMAAAE GIEPVAVARE LAARLTTPAE GEALGFLYVS DALARRLPEL LATLREATGV 
THWTGTVGIA LCCTGREIYD RPAAVAMLGS FPAGSARVLP PMTENDDALT ALLADWDTQD
PARFALLHGD PTHGTTPAII RHLGEHTQIF GVGGIASSQG DYLSVADEVV QGAVSGVLFA
ESVPVATAHT QGCTPIGPVH RITAASNNVL IQLDGRPALD VFEEDIGEVL ARDLQRAGGF
IVAGLPVPGS DTRDYLVRNL VAVDTGQRLV AIGEHVREGD EILFCRRDGN AALEDLKRML
ADLKRRAPNG ARGAVYVSCL GRGRHQFGDD SQELRIIAEE LGDIPLVGFF ANGEIFHNRL
YGYTGVLTLF L