Gene Tgr7_3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_3239 
Symbol 
ID7315614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp3385155 
End bp3386996 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content66% 
IMG OID643618140 
ProductTrkA-C domain protein 
Protein accessionYP_002515294 
Protein GI220936395 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0010645 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAAA CCATCGCGCT GACACCCGAG ATGATGGTGG TCCTCGGGCT GCTGGGCTTT 
ACCATCTTCC TGTTCGTGTC CGAGATCGTG CGGGTGGACG TGGCCGCGGT GTCCGTGATG
GTGTTGCTGG GGCTGATCAG CATGATCCCG GGCCTGGGGG GCGTGGCGGA CACCCATAAG
CTGTTCGACG GCTTCGCCAG TAATGCGGTG ATCTCCATCA TCGCGGTGAT GATCATCGGC
GCCGGCCTGG ACAAGACCGG GGTGATGAGC CAGGTGGCTT CCTTCATCAT GCGCGTGGGC
GGGACCACGG AGAAACGCGT CATCCCCATG GTCTCCGGCA CCGTCGGCGT GATCTCAAGC
TTCATGCAGA ACGTGGGCGC GGCGGCCCTG TTCCTGCCGG TGATCTCGCG CATCTCCGCG
CGCACCGGCC TGCCCATGTC CCGGTTGCTC ATGCCCATGG GCTTCTGCGC CATCCTGGGT
GGCACCATGA CCATGGTGGG CTCCAGCCCG CTGATCCTGC TCAACGACCT GCTGCCCGCG
GGCATGGAAC GCTTCGAGCT GTTCGACGTG ACCCCCATCG GCCTGGCCCT GGTGACCACC
GGCATCCTGT ACTTCGTGCT GCTGGGCAAG TACGTGCTGC CGGCGGTGCG CAATGACGGC
GCCAGCGGCG AGAGCACCGT GGACTACTTC AAGCGGGTCT ACGGCCTGGA CTACACCATC
CGCGAATACA CCCTGCCCTC CAGCCACCCC ATGTCCGGTC ACACGGTCAG CGACCTGGAG
CGGGAATACG GCATCAACGT CATCGGCGCC ATGGTCAGCG GCGACCTGCG CGTGGCCCCC
TGGCCCGGCT ACCAGCTCAA CGGCACCGCG CGCCTGGCGG TGCTGGGCCG CGCCGACCGG
CTGGATCAGT TCGCCGAGCG CGCCGGGGTC AAGACCAGGG GGTACCTGGA CGTGTTCTCC
GACGCCCTCT CCCACACCAA GTCGGGCATC GCCGAGGTGG TGATCCCGCC CGGCTCCGAC
CTGATCGGCA AGACGGTCAC CGAGATCGCC ATGCGCAAGA CCCACGGCCT GACGGTACTG
GCCATCCACC GCGGCGAGGA GACCATCCGC GAGGGCCTGC GCGACGTGCC CCTGCAGGCG
GGTGATACCC TGGTCTGCCA CTGCAGCTGG AGCGCCCTGG CGCGGGTGGA GAAGAACCGC
GACTTCGTGG TGGTTACCAG CGAATACCCC CACGAGGAAC TGCGCCCCCA AAAGGTGGGC
TTCGCCGTGC TGTTCTTCGC CATCGCCCTG GGCCTGATCC TGTTCACCGA CCTGCGCCTG
TCCGTAGCCC TGCTGGTGGG TGCCGTGGGC ATGATCCTCA CCGGCGTGCT CAACATGGAC
GAGGCCTACA AAGCAGTGAG CTGGAAGACG GTGTTCCTGC TGGCGAGCCT CATCCCCCTG
GGCGCGGCGG TGCAGGAAAC CGGCACCGCC GCCTGGATCG CCCACCAGAC CCTGAACCTG
CTGGGCGACG TGGCCCCCTG GGTCCTGCAG GCGGCCATCG CCATCCTGGC CACCTTCTTC
ACCCTGGTCA TGTCCAACGT GGGCGCCACC GTGCTGCTGG TGCCGCTGGC GGTGAGCATC
GCCTTCGCCG CCCAGAGCAT GGGCATGGAC GCGGACCCGC GGGTGTTCGC CCTGACCGTG
GCCATCGCCA CCTCCAACTC CTTCCTGATC CCCACCCACC AGGTGAACGC CCTGATCATG
GGTCCGGGTG GCTACCGGGT GAAGGACTTT ATGAAGGCCG GCGGCATCAT GACGGTGCTG
TTCCTGGTGG TGTCGCTGAC CATGCTGAAC CTGATCTTCT AA
 
Protein sequence
MQETIALTPE MMVVLGLLGF TIFLFVSEIV RVDVAAVSVM VLLGLISMIP GLGGVADTHK 
LFDGFASNAV ISIIAVMIIG AGLDKTGVMS QVASFIMRVG GTTEKRVIPM VSGTVGVISS
FMQNVGAAAL FLPVISRISA RTGLPMSRLL MPMGFCAILG GTMTMVGSSP LILLNDLLPA
GMERFELFDV TPIGLALVTT GILYFVLLGK YVLPAVRNDG ASGESTVDYF KRVYGLDYTI
REYTLPSSHP MSGHTVSDLE REYGINVIGA MVSGDLRVAP WPGYQLNGTA RLAVLGRADR
LDQFAERAGV KTRGYLDVFS DALSHTKSGI AEVVIPPGSD LIGKTVTEIA MRKTHGLTVL
AIHRGEETIR EGLRDVPLQA GDTLVCHCSW SALARVEKNR DFVVVTSEYP HEELRPQKVG
FAVLFFAIAL GLILFTDLRL SVALLVGAVG MILTGVLNMD EAYKAVSWKT VFLLASLIPL
GAAVQETGTA AWIAHQTLNL LGDVAPWVLQ AAIAILATFF TLVMSNVGAT VLLVPLAVSI
AFAAQSMGMD ADPRVFALTV AIATSNSFLI PTHQVNALIM GPGGYRVKDF MKAGGIMTVL
FLVVSLTMLN LIF