| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3228 |
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| Symbol | |
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| ID | 7315601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3377854 |
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| End bp | 3378366 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643618127 |
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| Product | Tfp pilus assembly protein PilV-like protein |
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| Protein accession | YP_002515283 |
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| Protein GI | 220936384 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGT CCAAATCCCA CTGTCTTCAC AACCCGCAGG CCATGATGCG CTCCATGTCA
CGGTCTCAGC GAGGCTTCAC GCTCGTCGAG GTGCTCATTG CAGTCCTCGT GCTGGCCATC
GGGCTGTTGG GCCTTGCCGG ACTCCAGGCT TCATCGTTGC GTTTCAATAA CGACGCACAG
TTGCGCACTC AGGCGACGTT GCTTGCCTAC GATATGGTTG ATCGCATGCG CGCCAACCGT
GCGCAAGCGG CCGACTATGA CACGGGGGGA TTCAACAGTG CCAATTGTGG TGACACCAGC
GGCGGTTCCA TGGCCGCGCA AGACACTACC GATTGGCTTG CCCAGCTTGA TTGTCTGTTG
CCACGGGGCG AGGGTTCCAT AGCGGTGGTG ATCACCCCCA ATGCAGTCCC GGCCTACAAC
GAGATCGACG TCACGATAGT CGTGCGCTGG GATGAGGACC GCGACGGCGT ACCGGATAAC
TACCGCCAGT TCCAGTTCCG TACGAGGCTC TAG
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| Protein sequence | MSESKSHCLH NPQAMMRSMS RSQRGFTLVE VLIAVLVLAI GLLGLAGLQA SSLRFNNDAQ
LRTQATLLAY DMVDRMRANR AQAADYDTGG FNSANCGDTS GGSMAAQDTT DWLAQLDCLL
PRGEGSIAVV ITPNAVPAYN EIDVTIVVRW DEDRDGVPDN YRQFQFRTRL
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