| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3225 |
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| Symbol | |
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| ID | 7315598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3372510 |
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| End bp | 3376055 |
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| Gene Length | 3546 bp |
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| Protein Length | 1181 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643618124 |
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| Product | putative type 4 fimbrial biogenesis protein PilY1 |
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| Protein accession | YP_002515280 |
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| Protein GI | 220936381 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTGCA AAGATAACAA GTGGGTTAAG CGTGCTCAGG CCGCTCTGGC GGGAATGGCT
TGTGCCCTTA TGACCGTGTC TCCGGGTCTC GCACAGGCAA ACGTAAATAT TGCGAATGTC
CCATTGTTCC TGACAACGAG TATTGATCCG AACATCATGT TCATCCTGGA CGACTCGGGT
TCGATGCATT GGGAAATCAT GCCTGATCAG CATATCAGTA ATGCCGCTTA CTACGTCTAC
GGCCGCATAG ATAACCTATA CAGCAGCGGG AATTACACGG ACAGAGCGCC GACCTTTGCT
GACGACCCTT ACAACGCGTT CGCGCGATCT CCTGTTGGAA ACACCGTCTA CTATGATCCA
GGTGTGACCT ATAGTCCCTG GCCTAGGGCA GATGGTAGCG GGTCAATGCC CAATGCCAAC
CCATCTGCCG CGCTGCACAA TCCGATGCGC CCAGCGCGAG GGAGTCGTAA TCTCACGGCT
AACAATACAC GCAATGGTAG TTGGCGACGT TGTAGCACCA TTACGCGTGA TGTCAGCGGT
ACATTTAATT TTTCAGGCTG TGCGACTTTC ACTGCGACTC AGACATTCTG GCCGGCTGTC
TATTATTGGC ACGACGGTTC TGATGGCTAC GACTTCAGTA ATTACGAGAG GGTCGAGATA
CGATCAGACA CCCCCTTTTA CACGGATCAC GGACGTGAGA ATCGGACCGA TTGTGCTAGC
GCAGCGACTG CCACCTGTAC ATATGACGAA GAGATACAAA ACTTCGCAAA CTGGTACACA
TACTATCGCT CGCGAATCCT CGCGGCACGC GGGGGCATCG GCCTGGCCTT TGCCGAGCAA
CCGGAAAATA TGCGTGTCGG TTACGGTACG ATCAATGCGG GCAGTTCGAG TGTCGATGGG
GTAACAACCG AAAAGATCGT ACGCGGGGTA CGCGCCTTTT CCGGCGCGGA CAGGCAGGCT
TTCTTCGATT TGCTCTATGA CCGAGACATC CCCGCGGCCG GAACGCCACT AAGAAGATCA
CTTGAGGCTG CGGGTGAGTA TTTCCGGCGA AGTGACAGTC GCGGCCCTTG GAGTACGACT
CCTGGTTTAT CAGGCGGTGA AGATCTGAGC TGCCGTCAGA GCTTTGCCAT CTTGATGACG
GATGGATACT GGAATGGTCC TAATCCCTCT GATGCAATTG GCAATGCCGA TAACTCGTCC
GGGCCGCTTC ATGTAAACCC GAACGGCGAT AACTTCCAGT ACGTTCCAAG TGATCCGTTC
CGGGATGGCG TCTCGCGTAC ACTCGCAGAC GTGGCCATGT ATTACTGGAA GAACGATCTG
CGGCCGGATA TGGATAACAA CGTCCCTAGC AACGCCCGTA ACCCTGCATT TTGGCAGCAT
ATGGTGACCT ATGGTATTGG TTTGGGGGTA ACAGGATCCG TTGATCCCGA TGATGCTTGG
CAGGCAGTAA CGGACGGCAC GGCAATCAAC TGGCCTGATC CGTACAATAG TGACCCAGCA
AAAATTGATG ATCTATTGCA TGCTGGAGTT AACAGCCGCG GCGGATTCTT CAGCGCCCAG
AACCCTGTCG CTTTCGCCAA CGAGTTGGCG CAGGTCTTGG AAGACATCAT CGGGCGAGTA
GAGGATTCGG CCACCTCAGC GGCCGCCAGC GCTGCAGTCA TTCAGGCAGA TACCTTGCTT
TATCTCGCGG GCTTTCGCAG CGGCGACTGG ACCGGTGAAC TGAAGGCCTT CCAGATTATG
GGTGACGGCA GCGTTGGCGC ACTTGCTTGG GATGCGGAAG CGCGGCTTGC CGCAATGACG
CCGTCCGAGC GCAACCTGTA CACGGCGAAC AGTGCCACCG GAAATGCCGT TTCGTTTGAT
TTCGCCCAGT TGAGCCCGGC ACAGCAGGCG GCACTGAATC GTGCCACCGA CGACTCCCTT
GATGGCCGAG GTGATGACCG CATCGACTGG CTGCGGGGAG AATCGGTAAC GGAATTCCGC
AGTCGCACTA CGCCTCTGGG AGAGCGGCGA CTTCTGGGTG ACATCGTGCA CTCCTCGCCA
CAGTTCGTCG GCCGGCCGAA CCTGGGTTAC AGTCTGCTCC CTGGTGCTGA GGGCTCGGCC
TACAGCACAT TCCGTTCGAG CTCGCCTTAT TCTTCGCGAC CATCGGCCAT TTATGTCGGG
GCAAACGATG GATTGCTGCA CGCCTTCCAT GGCACCACCG GAGGAGAACT CTTCGCTTAC
ATGCCTTCCG AGCTTCTTTT GCCGGAAACC GGGCACCAGC ATGCCCGGAT CAATCGCCTG
ATGGATCCGG ACTACGCCCA CAGATACTTC GTGGATGGCG CTGCGACCAT TGGTGATGTT
TATGTCGGTG GGAGTTGGAA GACTGTGCTT ATCGGTACCA TGGGTGCCGG CGGACGGACG
GTCTTTGCGT TGGACGTCAC AGACCCTACG AACTTCGATG AATCCAAGGT GCTTTGGGAA
TTCACCCACC CTGGGCTGGG TTATGGTGTG ACGAATCCAT CTATCGTGCG CATGCGAAAC
GGACAGTGGG CAGCCGTGTT TGGAAACGGC TACAACAGTG CCAATCACAC CGCCGGTCTG
TTTATCGTAC CCATTGGCAA TCCGTCATCC TATGTATTTG TGGATACGGG GGTGGGGAAC
AGCACGACGC CGAATGGCTT GGCGCCCGTG GTGGTGACTG ACGCGCCCAG TGGCGATCTC
AATGCGCGGC TTGTATACGC AGGAGATCTC CAAGGGCGGA TGTGGCGCTT CGACGTGTCG
TCGACTAACC CCAATCAATG GAATAACGCC GGAAATCGCT CGGTGCTTTT CCAGGCGCGT
GATGCCAGTG ATGTACCTCA GCCAATTACG GCAAGGGCCC AGGTGACCGC GCATCCCACT
GAACAGGGTA CGCTCATGGT TCTCTTTGGT ACCGGTAGTT ACTTTAGAAC ACAGGATGGT
GATTTGACTG CCCCACAGGT TCAGAGTCTC TATGGACTAA AGGATCAGAA TGGTGCCGCC
ATCTCTAGTC GAAATGATCT CGTAGAACAG GTGATCGTGT GGCAGGGTGA TCAAACATTC
ACCACGTCAG ATGGGGATGT GACCTATACG CTGCGGCAAG TGTCCGAAGA GACAGTGACT
ACAGCTGACA AGGGTTGGTA TCTGGATCTG GTCTATGAGG GCAACAACCA GGGTGAACGG
GTCATCAGTG AGCCCACATT TCCCTCTGGG CCCGTTGGTG AGCGCGTTCG ATTTGCAACA
ATGATTCCTG ACGAGGATCC TTGTGGTACT GGCCGCCGTG GCTTCCTGAT GGACATCATG
CTCGCTACTG GCGGGGCAGT ACCTTACACC GTGTTTGATC TTGACCAGGA TGGTGTGTTC
GATAGCGGAG ATTATGTGAA TAACTTACCC GTCAGCGGTG TCGGTTTCGG CGGGGGCGAG
AAGCCAACAA CCGTTCTGAA CCCGGACACG GGCATCGACC ATATTTTCGG TGGTCAGGGT
GATGACCTTC GTGGCCTGCC AGGTGGACAG GCCTCTGGTC GCCAATCCTG GCGGCAGTTG
CGTTGA
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| Protein sequence | MRCKDNKWVK RAQAALAGMA CALMTVSPGL AQANVNIANV PLFLTTSIDP NIMFILDDSG
SMHWEIMPDQ HISNAAYYVY GRIDNLYSSG NYTDRAPTFA DDPYNAFARS PVGNTVYYDP
GVTYSPWPRA DGSGSMPNAN PSAALHNPMR PARGSRNLTA NNTRNGSWRR CSTITRDVSG
TFNFSGCATF TATQTFWPAV YYWHDGSDGY DFSNYERVEI RSDTPFYTDH GRENRTDCAS
AATATCTYDE EIQNFANWYT YYRSRILAAR GGIGLAFAEQ PENMRVGYGT INAGSSSVDG
VTTEKIVRGV RAFSGADRQA FFDLLYDRDI PAAGTPLRRS LEAAGEYFRR SDSRGPWSTT
PGLSGGEDLS CRQSFAILMT DGYWNGPNPS DAIGNADNSS GPLHVNPNGD NFQYVPSDPF
RDGVSRTLAD VAMYYWKNDL RPDMDNNVPS NARNPAFWQH MVTYGIGLGV TGSVDPDDAW
QAVTDGTAIN WPDPYNSDPA KIDDLLHAGV NSRGGFFSAQ NPVAFANELA QVLEDIIGRV
EDSATSAAAS AAVIQADTLL YLAGFRSGDW TGELKAFQIM GDGSVGALAW DAEARLAAMT
PSERNLYTAN SATGNAVSFD FAQLSPAQQA ALNRATDDSL DGRGDDRIDW LRGESVTEFR
SRTTPLGERR LLGDIVHSSP QFVGRPNLGY SLLPGAEGSA YSTFRSSSPY SSRPSAIYVG
ANDGLLHAFH GTTGGELFAY MPSELLLPET GHQHARINRL MDPDYAHRYF VDGAATIGDV
YVGGSWKTVL IGTMGAGGRT VFALDVTDPT NFDESKVLWE FTHPGLGYGV TNPSIVRMRN
GQWAAVFGNG YNSANHTAGL FIVPIGNPSS YVFVDTGVGN STTPNGLAPV VVTDAPSGDL
NARLVYAGDL QGRMWRFDVS STNPNQWNNA GNRSVLFQAR DASDVPQPIT ARAQVTAHPT
EQGTLMVLFG TGSYFRTQDG DLTAPQVQSL YGLKDQNGAA ISSRNDLVEQ VIVWQGDQTF
TTSDGDVTYT LRQVSEETVT TADKGWYLDL VYEGNNQGER VISEPTFPSG PVGERVRFAT
MIPDEDPCGT GRRGFLMDIM LATGGAVPYT VFDLDQDGVF DSGDYVNNLP VSGVGFGGGE
KPTTVLNPDT GIDHIFGGQG DDLRGLPGGQ ASGRQSWRQL R
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