Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_3197 |
Symbol | |
ID | 7315569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 3346830 |
End bp | 3347129 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643618096 |
Product | carboxysome shell protein, CsoS1C |
Protein accession | YP_002515253 |
Protein GI | 220936354 |
COG category | [C] Energy production and conversion [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.452211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAATG AACGTTTTGG TGTGGCCCTC GGCATGATCG AGACCCGTGG TCTGGTTCCC GCGATCGAAG CGGCTGATGC CATGACCAAG GCCTCCGAAG TGCGCCTGAT CGGCCGTCAG TTCGTGGGTG GTGGTTATGT GACCGTGCTG GTGCGCGGTG AGACGGGTGC TGTGAACGCC GCCGTGCGTG CCGGCGCCGA TGCCTGCGAG CGCGTGGGTG ACGGCCTGGT GGCTGCTCAC ATCATCGCCC GTGTGCATTC CGAAGTGGAA AGCATCCTGC CCGAGCGCGT GGAAAAGTAA
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Protein sequence | MANERFGVAL GMIETRGLVP AIEAADAMTK ASEVRLIGRQ FVGGGYVTVL VRGETGAVNA AVRAGADACE RVGDGLVAAH IIARVHSEVE SILPERVEK
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