| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3196 |
|---|
| Symbol | |
|---|
| ID | 7315568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 3346505 |
|---|
| End bp | 3346798 |
|---|
| Gene Length | 294 bp |
|---|
| Protein Length | 97 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643618095 |
|---|
| Product | carboxysome structural peptide CsoS1B |
|---|
| Protein accession | YP_002515252 |
|---|
| Protein GI | 220936353 |
|---|
| COG category | [C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.446917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAATG AACGTTTTGG TGTTGCCCTT GGCATGATCG AAACCCGTGG TCTGGTGCCC
GCGATCGAAG CGGCTGATGC CATGACCAAG GCCTCCGAAG TGCGCCTGAT CGGCCGTCAG
TTCGTGGGTG GTGGTTATGT GACCGTGCTG GTGCGCGGTG AGACGGGTGC TGTGAACGCC
GCCGTGCGTG CCGGCGCCGA TGCCTGCGAG CGCGTGGGTG ACGGCCTGGT GGCTGCTCAC
ATCATCGCCC GTGTGCATTC CGAAGTGGAA AGCATCCTGC CCGAGAAGCC CTGA
|
|---|
| Protein sequence | MANERFGVAL GMIETRGLVP AIEAADAMTK ASEVRLIGRQ FVGGGYVTVL VRGETGAVNA
AVRAGADACE RVGDGLVAAH IIARVHSEVE SILPEKP
|
|---|
| |