Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_3180 |
Symbol | |
ID | 7315552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 3329741 |
End bp | 3330262 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643618079 |
Product | riboflavin biosynthesis protein RibD domain-containing protein |
Protein accession | YP_002515236 |
Protein GI | 220936337 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.694404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGCAA GCGTATTCAT CGCCACCAGC CTGGACGGCT TCATCGCCCG CGAGGATGGC GGCATCGACT GGCTCCCCGC CTTCGGGAAG GAGGACTACG GTTACCAGGC GTTCTTTGAT TCGGTGGATG TGCTGGTCAT GGGGCGCAAC ACCTATGAAC TGGCGCGCGG CTTCGGCGCC TGGCCCTACG GGGACACGCC GGTGGTGGTG CTGAGCCATC GTGGCGTTGA GATCCCGCCG GATCTCGCGG CCACGGTGGA GTGCCTGGCC GCGCCGCCCG GCGAGGTGCT GGAGAGGCTC GCGGCACGGG GGCTGCGGCA TGCGTACATC GACGGCGGCA AGACCATTCA GGGCTTTCTG TCTGAAGGGC TCATCGATGA ACTGACCCTC ACCCGGGTGC CGGTGCTGCT CGGCCGCGGC ATTCCGCTGT TCGGCCCCCT GGCGGGTGAT GTGTATCTCG AGCACCTTGA GACCCGGTCC TACCCGGACG GGCTGGTGCA GAGCCGTTAC CGGATCGCCT GA
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Protein sequence | MRASVFIATS LDGFIAREDG GIDWLPAFGK EDYGYQAFFD SVDVLVMGRN TYELARGFGA WPYGDTPVVV LSHRGVEIPP DLAATVECLA APPGEVLERL AARGLRHAYI DGGKTIQGFL SEGLIDELTL TRVPVLLGRG IPLFGPLAGD VYLEHLETRS YPDGLVQSRY RIA
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