| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3178 |
|---|
| Symbol | |
|---|
| ID | 7317408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 3327033 |
|---|
| End bp | 3328931 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643618077 |
|---|
| Product | pyruvate kinase |
|---|
| Protein accession | YP_002515234 |
|---|
| Protein GI | 220936335 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0469] Pyruvate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCCA CTCAGGCCAT GAGCACCCCG CTTCAGACCG AGGAGGCCGG CCGTCTTCTC
GACGCCCTGT TGGCGCTGCG TACCCGGATC ACCCGGCACG CCGCTGCCCG CCTGTCCCGT
TTCGCGCGGG ATTTTCCCGA GGGCCCGCCG CCCAGCGCCG TGAACCTGGC CCACTACCTG
GCCCTGCGCA CCGTGGACCT GCGCCCCTTG CAGAGCGGCC TGACCCGGCT CGGCCTGTCT
TCCCTGGGGC GCAGCGAGTC CCACGTGATG ACCGCCCTGG ACCAGGTGAT CCGGGTGCTG
GAAGTGCTCA CGGCCCGCGG CGGCGATGAC GCCGATCGCC CGACGTCCGA CTTCGAGTCC
GGGCCGAAGT GCCTGGCCGA ACATGCGCGA AGCCTGTTCG GCCCGCCGCC GACCGGTCGG
GATGTGCGCA TCATGGTGAC CCTGCCCACA GAGGCCGCCC GTGAACCCGG CCTGGTGCAG
CGGCTGGTGG CCACGGGCAT GGATGTCGCA CGGATCAACT GCGCACATGA CGACCCCGAG
GCCTGGAGCC GCATGATCCG TCATGTGCGC GAGGCGTCCG AGGCCAGCGG TCGGCCCTGT
CGCATCCAGA TGGACCTGGC CGGCCACAAG CTGCGCACCG GGACGCTGGC ACCGGCACCG
CCGGTGCTGC ACCTGCGTCC GGTCCGGGAC GCTCTGGGCC GGGTCCTTGC CCCGGCCACC
CTGGCACTGG TGGCCGATAC CAGTGCCCCG GGGAGTGACG CCGCCCTGCC CCGACTCGCC
CTGCCTGCCG CGGTGCTCGC CCGGCTGCAA CCCGGGGACC GCCTGCGTTT CCGGGACACC
CGGGGCAAAC GACGCAGCCT GCAGGTGACG CAGAACACGG CCGATGGCCT GCTGGCCCAG
TGCGAGGCGA CCTGCTATCT GAACCCCGAC ACCCGCCTGA GCGCAGAGCG CATGGCGGAG
GACGGCCTCT GGCATGCGCT GGCCCGGGAC ATCCCGCCCG GTGGTTTCCT GCTTTGCCCG
GTGGAGATCC GCCTGCATCG CGGTGATCGC CTGAGCCTGA CCCGCGAGGC CATCCCCGGC
GAACCGGCAC GCCTGGACGC CCAGGGCCAT GTGATCGCGC CGGCCCACGT GAGCTGCACC
ACGCCCCAGG CCCTGGAGCG TCTCACCGCG GGCCAGGCCG TGTGGATCGA CGATGGCAAG
CTGGGCGGCG TGGTGGAGGC GGTCGATGCC GAAGGGGTGC ACCTCAGCAT CACCCACTGC
CGGCCCCAGG GTGTGCGCCT GCAGGCGGAC AAGGGGCTCA ATTTCCCCGG CGCGGACCTC
GGCCTGCCAC CGCTCACCGC CAGGGACCTG GAAGACCTGG ACTTCGTCGC CGCCCATGCC
GACCTGGTGG GCTACTCCTT CGTCGAGACC CGCGAGGACA TGCAGGCGCT GATCCAGGCC
CTCTCGGAGC GGGGCGCCTC CCGGCTCGGC ATTGTGGCCA AGATCGAGAC CCAACGCGCC
CTGGCTCACC TGCCCGACAT CATCCTGAGC ACCATCGGCC GCCACCCCCT GGGCATCATG
ATCGCCCGGG GCGACCTGGC CGTGGAGATC GGCGGCGAGC GCATGGCGGA GATCCAGGAG
GAACTCCTGT GGCTGTGCGA GGCGGCCCAC GTGCCGGTGA TCTGGGCCAC CCAGGTGCTG
GAGACCCTGG CCAAGAAGGG CGTGGTCACG CGCCCGGAGA TGACCGATGC CGCCATGTCC
GGGCGCGCCG AGTGCGTCAT GCTCAACAAG GGGCCCTACA TCGTGGATGC CGTGCACACC
CTGGACGGCA TCCTGCGCCG CATGCAGGAA CACCAGCGCA AGAAGACCTC GCGGCTGCGG
GCGTTGCGCC TGGCGGGGAT CGATCAGGAC CAGGAATGA
|
|---|
| Protein sequence | MVSTQAMSTP LQTEEAGRLL DALLALRTRI TRHAAARLSR FARDFPEGPP PSAVNLAHYL
ALRTVDLRPL QSGLTRLGLS SLGRSESHVM TALDQVIRVL EVLTARGGDD ADRPTSDFES
GPKCLAEHAR SLFGPPPTGR DVRIMVTLPT EAAREPGLVQ RLVATGMDVA RINCAHDDPE
AWSRMIRHVR EASEASGRPC RIQMDLAGHK LRTGTLAPAP PVLHLRPVRD ALGRVLAPAT
LALVADTSAP GSDAALPRLA LPAAVLARLQ PGDRLRFRDT RGKRRSLQVT QNTADGLLAQ
CEATCYLNPD TRLSAERMAE DGLWHALARD IPPGGFLLCP VEIRLHRGDR LSLTREAIPG
EPARLDAQGH VIAPAHVSCT TPQALERLTA GQAVWIDDGK LGGVVEAVDA EGVHLSITHC
RPQGVRLQAD KGLNFPGADL GLPPLTARDL EDLDFVAAHA DLVGYSFVET REDMQALIQA
LSERGASRLG IVAKIETQRA LAHLPDIILS TIGRHPLGIM IARGDLAVEI GGERMAEIQE
ELLWLCEAAH VPVIWATQVL ETLAKKGVVT RPEMTDAAMS GRAECVMLNK GPYIVDAVHT
LDGILRRMQE HQRKKTSRLR ALRLAGIDQD QE
|
|---|
| |