| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3176 |
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| Symbol | |
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| ID | 7317406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3324926 |
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| End bp | 3325738 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643618075 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII |
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| Protein accession | YP_002515232 |
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| Protein GI | 220936333 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGAAG GCGATACCCT CCACAAGCTG GCCAAGGCCC TGCAACCCCG ATTGCAGGGG
CAGGCCATTC GGCTGACCCG CCTGCGGGGC GTGCCGCCGC GCACCCCCCT GCCCGAGGGA
CGGGTCGAGT CCGTGACCGC CGAGGGCAAG CACCTGCTGA TCCGCTTCAC CGGCGAGGAG
GGCGGCGCAC AGGTGCTGCG TACCCACCTG GGCCTGTGGG GGGGCTGGCA CCAGTACGCG
CCGGGCGAGC CCTGGCGCAA GCCCGCCCGC CAGGCCTGGG TCGTGCTTCA GGCCGACGAC
GCGGTGTTCG TGTGCTTCAA CGCCCGGGAG GTGGAGGTGA TGTCCGCCGG GGGCGTGCGG
CGCCGGGGGC TGACGGCCCG ACTGGGTCCC GACCTGCTCG GCGCCGATGT GGACCTGGCG
GCCCTGCCCG CCCGGGCCCG GGAGATCCTG CCCGGTGAGG CGCCCCTGGT GGACGTGCTG
CTGGACCAGC GCGTCGCGTC CGGGATCGGC AACGTCTACA AGTCCGAGCT GTTGTTCCTG
CTCGGGCTCG CGCCCCTGAC GCCGCTCGAG GCCGTGAGCG ACGAGACCCT GGTCGCGGCC
TATGCCCTGG CCCGGGATCT GCTCTCCCGC AATCTCGGCT ACGGACCGCG TACCACCCGC
TTCGAGGCGG ACGGACACGG CCGCCTCTGG GTCTACGGTC GCCGGGATGT GCACTGCCTG
AAATGCGCAT CCGCCATCCG CTATGCCCGG CTGGGCCGGG ATCAGCGCGG CACCTACTGG
TGCCCGAACT GTCAGGGAAA TGCGGGCATA TAA
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| Protein sequence | MPEGDTLHKL AKALQPRLQG QAIRLTRLRG VPPRTPLPEG RVESVTAEGK HLLIRFTGEE
GGAQVLRTHL GLWGGWHQYA PGEPWRKPAR QAWVVLQADD AVFVCFNARE VEVMSAGGVR
RRGLTARLGP DLLGADVDLA ALPARAREIL PGEAPLVDVL LDQRVASGIG NVYKSELLFL
LGLAPLTPLE AVSDETLVAA YALARDLLSR NLGYGPRTTR FEADGHGRLW VYGRRDVHCL
KCASAIRYAR LGRDQRGTYW CPNCQGNAGI
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