| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3149 |
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| Symbol | |
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| ID | 7317379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 3297967 |
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| End bp | 3299169 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643618048 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_002515205 |
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| Protein GI | 220936306 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.618172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGCGA CCATCGCAGA CAGCACGGAA AGCGCGGAAA GCGCCGACAG CTACACCATC
GCCAAGCCCC GCATCCTGGT GGTCGAGGAC TCCACCACCA TGCGCAAGGC GATCCGCCGC
CTGCTCAGCA ACGACTTCGA GGTGGTGGAG GCCGACGACG GCGACACCGG CTGGGAGCTG
GTGCGCGATG ATCCCAGCAT CCAGGTGGTG TTCTCCGACC TGATGATGCC GCGCATGAAC
GGCTTCATGC TGCTGCGCCA GATCCGTGAG TCCATCCACA GCCGCATCAG CGAGTTGCCG
GTGATCATCA TCACCGGCCA CGAGGACGAC GAGAAGATGC GCCGTCAGGC CATGGCCCTG
GGCGCCACCG ACTTCATCAC CAAGCCCTTC GACTCCCTGC AGCTGCGCGC CCGCGCCAAG
GCCCACGCCA AGTTCGAGCA CACCCAGCGC CGCCTGCAGC AGGCCACCCA GGCCCTGGAG
CAGCGCAGCA CCATCGACCC GCTGACCGGC CTGGCCAACG CCAACTACTT CCGCGAGCAC
GGCCCGGTGC TGCTGTCCTT TGCCATCCGC CACGGCAACG AGCTGTCGGT GCTGCGCATC
GACGTGGACC AGTACGACGA GCTGTTCCGC AAGCGCGGCC GCCAGGTGGC GGACAAGGTG
CTGGTGAACA TCTCCAAGAT CATCAGCGGC AGCGTGCGCC GGGAGGACAC GGTCGCCCGG
GTGGGCCTGT CCAAGTTCGC CGTGCTCATG CCCGGTGCCA ATGAACAGGT GGCCCGCGAG
GTCGCCAGCA AGATCCACGA TCTCAACCAG AAGGCGGGCT ACCGCCTGGG CAACACCCGC
TTCGCCATGA CCGTGAGCGC GGGCCTGGTG ACGCCGGCCC TGTACGAGAA CCTGCAGTTC
GACGAGGTGA TCAAGCTGGC CGAGGCGCGG GTGGCCAAGG CCATGGCCTC CGGCGGCAAC
ACGGTGGTGT TCGAGGAAGG CCCGCCGGCG GAGAGCCGCG CCGCCCCCGA GGGGCGCCGC
GTGGCACTCT CCGTGGAAGA GGCCCTGATC CTGCTGCGCA CCGGCGACAC CGCCAAGGTC
AACGAGCAGC TCGGCCCCCT GCTGCGGCGC ATGTTCCCGT TGCTGGTCCA CGCCAACCGC
CAGCTTCGCC TGGGCATGGA CGGCGCGCTG CTGCAACTGA AGAACCGCGC CAAGGAGCTT
TGA
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| Protein sequence | MHATIADSTE SAESADSYTI AKPRILVVED STTMRKAIRR LLSNDFEVVE ADDGDTGWEL
VRDDPSIQVV FSDLMMPRMN GFMLLRQIRE SIHSRISELP VIIITGHEDD EKMRRQAMAL
GATDFITKPF DSLQLRARAK AHAKFEHTQR RLQQATQALE QRSTIDPLTG LANANYFREH
GPVLLSFAIR HGNELSVLRI DVDQYDELFR KRGRQVADKV LVNISKIISG SVRREDTVAR
VGLSKFAVLM PGANEQVARE VASKIHDLNQ KAGYRLGNTR FAMTVSAGLV TPALYENLQF
DEVIKLAEAR VAKAMASGGN TVVFEEGPPA ESRAAPEGRR VALSVEEALI LLRTGDTAKV
NEQLGPLLRR MFPLLVHANR QLRLGMDGAL LQLKNRAKEL
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