| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3110 |
|---|
| Symbol | |
|---|
| ID | 7317340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 3258095 |
|---|
| End bp | 3259321 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643618009 |
|---|
| Product | Formamidase |
|---|
| Protein accession | YP_002515166 |
|---|
| Protein GI | 220936267 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2421] Predicted acetamidase/formamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.441852 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAA CACTGATCAG TTACGATTTC AGCAAGCCAC CCGAGGAGCA GGACATCAAG
CCACACAACC GGTGGCATCC TGACATTCCC ATGGCAGTCC GGGTCAAGCC CGGCGCCGAG
TTCCGCCTGC AGTGCTTCGA CTGGACCGGC GGCCAGATCG AGAACAACGA CAGCGCCAAC
GACATTCGCG ACGTGGACCT GACCAAGGTG CACTACCTGT CCGGCCCCGT GGGTATCGAG
GGTGCCGAGC CCGGCGACCT GCTGGTGGTG GACATCCTCG ACGCCGGCCC GCTGCCGGAT
CAGCTGTGGG GTTTCAACGG CATCTTCGCC CGGGAAAACG GCGGCGGCTT CCTGGTCGAT
CATTTCCCCG AGGCACGCAA GTCCATATGG GACTTCCACG GTATCTACAC CAGCTCCCGG
CACATCCCCA AGGTGCGCTT CCCGGGCATC ATCCACCCCG GCCTGATCGG TACCCTGCCT
TCCAAGGAAC TGCTCAAGCA GTGGAACGAC CGGGAAAAGG CCCTGGTGGA CACCGATCCG
AATCGTGTGC CGCCCCTGGC GACCCTGCCC TACGAAGAGA CCGCCCTGAT GGGCAGCATG
AAGGGCGAGG AGGCCAAGGC CGCCGCCCGT GAAGCGGCCC GTACCGTGCC GCCCCGCGAA
CACGGCGGCA ACTGCGACAT CAAGAACCTG TCCCGCGGTT CCCGGGTGTA CTTCCCCGTG
TATGTGAAGG AGGCCGGCCT GTCCATGGGC GACCTGCACT TCTCCCAGGG CGACGGCGAG
ATCACCTTCT GCGGCGCCAT CGAGATGGCG GGCTTCATCG AGCTGCGTGT CAACCTCATC
AAGGGCGGCA TGAAGAAGTA CAACATCAGC AGCCCGATCT TCCAGCCCAG CAAGATCGAT
CCCCAGTTCA AGGACTACCT GATCTTCGAA GGCATCTCCG TGGACGAGGA CGGCAAGCAG
CACTACCTGG ATGCGCACAT TGCCTATCGT CGCGCCTGTC TGGCCGCCAT CGACTACCTG
AAGAACTTCG GCTACTCCGG TGAGCAGGCC TACGCCATTC TGGGCACGGC GCCGGTGGAG
GGACATATCA GCGGTATCGT GGACATCCCC AACGTCTGCG CCACCCTGTG GCTGCCCACC
GAGGTGTTCG AGTTCGACAT CCATCCCACG GATGCGGGCC CGGCCATCGA GATCCCCTCG
GGTATCGATA CCTCGCGCAC CAGCTGA
|
|---|
| Protein sequence | MPETLISYDF SKPPEEQDIK PHNRWHPDIP MAVRVKPGAE FRLQCFDWTG GQIENNDSAN
DIRDVDLTKV HYLSGPVGIE GAEPGDLLVV DILDAGPLPD QLWGFNGIFA RENGGGFLVD
HFPEARKSIW DFHGIYTSSR HIPKVRFPGI IHPGLIGTLP SKELLKQWND REKALVDTDP
NRVPPLATLP YEETALMGSM KGEEAKAAAR EAARTVPPRE HGGNCDIKNL SRGSRVYFPV
YVKEAGLSMG DLHFSQGDGE ITFCGAIEMA GFIELRVNLI KGGMKKYNIS SPIFQPSKID
PQFKDYLIFE GISVDEDGKQ HYLDAHIAYR RACLAAIDYL KNFGYSGEQA YAILGTAPVE
GHISGIVDIP NVCATLWLPT EVFEFDIHPT DAGPAIEIPS GIDTSRTS
|
|---|
| |