Gene Tgr7_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_3100 
Symbol 
ID7317330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp3250459 
End bp3251058 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content72% 
IMG OID643617999 
ProductHupE/UreJ protein 
Protein accessionYP_002515156 
Protein GI220936257 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2370] Hydrogenase/urease accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCGC GACTGATCCC CCTCGCCCTG CTGATGCTGG CCCCCGGGCT CGTCCTGGCC 
CACCCGGGCC ACGGCCTGGA CGCCGGCCCG TCGTCCTCCG CACTGGCTGC CGGCCTGCTT 
CACCCCCTGC TGGGACTGGA TCACCTGCTG GCCATGCTCG GCGTGGGCCT GTGGGCCTCC 
CAGCGGGCCC TGCAACGTCA GGGCTACGGC ATTGCCGGCA TCTTCCTGCT GGTGCTGGCG 
CTGGGCTTCA TGGCCGGACT GGGCAGCGCG CCGGGTCAGT GGATCGAGAC CGGCATCCTG 
GGCTCCGTGA TCCTGGTGGG TGCCCTGGTG GCCCTGGGGC GCAATCTGCC CGCGGCCTTT 
GGCCTGGGGC TGGCGGCGCT GTTCGCGCTG TTTCATGGCC TGGCCCACGG CGCTGAAATG 
GGTGCCGGCC TGTCCGCCCC CCTGTTTGCG GCGGGCTTCC TGCTGAGCTC CAGCGCCCTG 
GTCGGCCTGG GTCTGCTGGC AGGACGATTC GGTCAGGGCC TGATGCGTGG TTCCATGCTG 
GTGCGCGCCG GCGGCGCCGG CATCCTGGCC GCGGGCCTGG TCATGATCTG GACGGTGTGA
 
Protein sequence
MTPRLIPLAL LMLAPGLVLA HPGHGLDAGP SSSALAAGLL HPLLGLDHLL AMLGVGLWAS 
QRALQRQGYG IAGIFLLVLA LGFMAGLGSA PGQWIETGIL GSVILVGALV ALGRNLPAAF 
GLGLAALFAL FHGLAHGAEM GAGLSAPLFA AGFLLSSSAL VGLGLLAGRF GQGLMRGSML 
VRAGGAGILA AGLVMIWTV