| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3090 |
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| Symbol | |
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| ID | 7316020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 3238052 |
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| End bp | 3239896 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643617989 |
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| Product | allophanate hydrolase |
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| Protein accession | YP_002515146 |
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| Protein GI | 220936247 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCACC CGCATCTGAG CCTGGACATC GACAGCCTGC ACCGCGCCTA CCGGGAGGGC
CGGCTGACAC CCGCCGAGCT GATCGACGAG GTGCTCGCGC GCATCGCCGC GCAACCGGAT
CGCCACGAAT GGATCCGGGT GCTGGACCGG GACGCCCTCA TGGCCCACGC CGCACGCCTG
GAAGGCGAGA GTCCCGACAC CCTGCCCCTG TACGGCATCC CCTTCGCCAT CAAGGACAAC
ATCGATCTCG CCGGCGTGCC CACCACCGCC GCCTGCCCGG CCTTCGCCTA TACGCCAGAG
CACAGCGCCT TCGTGGTCGA GCGCCTGATC GAGGCCGGCG CCCTGCCCAT CGGCAAGACC
AACCTGGACC AGTTCGCCAC CGGCCTGGTG GGCACCCGGT CACCCTATGG CGCCTGCGCC
AACGCCTTCG ACCCGGCCTA CATCTCCGGC GGATCCAGCG CCGGCTCGGC GGTCACCGTG
GCCACCGGGG TGGTGAGCTT TTCCCTGGGC ACCGACACCG CGGGCTCCGG CCGGGTACCG
GCGGCCTTCA ACAACCTGAT CGGCGTGAAG CCCACCCGGG GCCTGCTGTC CGCCTCGGGC
GTGGTGCCCG CCTGCCGCAG CCTGGACACC GTGTCCATCT TCGCCCTCAC GGTGCCCGAC
GCCGAGCGCG TACTGGCGGT GACCGCCGCC TTCGATGCGC ACGACGCCTA TGCACGGCCC
CGGCCGCTCA CCACCCACGG CTTCGATCCC GCCCGGTTCC GCTTCGGCGT GCCCCGGGCG
GAACAGCTGC AATTCTTCGG CAACGCCGAG GCCGAGCGCC TGTTCCACGA GGCGGTGGCG
CGCCTTCAAT CCCTGGGCGG GACGCGGGTG GAGATCGACT TCGCCCCCTT CCTGGACGCC
GCGCGCCTGC TCTACGAGGG CCCCTGGGTC ACCGAACGCT ACCTGGCCAC CCAGCCCCTG
ATCGACGAGG CACCCGGTGA ACTGCTGGCC GTGACCCGGG GCATCATCGG CGGCGGCGCC
GCGCCCAGGG CCACGGACTG CTTCCGCGCC CAGTACCGGC TCATGGACTA CAAACGCCAG
GCCGAGGCCG CCTGGCAGGC GGTGGACGTG CTGGTCACCC CCACCGCCGG GACGATCTAC
ACCATCGCGC AGGTGAACGC CGACCCGGTG CGGCTCAACT CAAATCTTGG CTACTACACC
AACTTCATGA ACCTGCTGGA CCTGGCGTCG CTCGCGGTAC CCGCCGGTTT CCAGGCCGAC
GGCCTGCCCT TCGGCATCAC CCTGATCGCC CCGGCCTTCG GCGACGGCGC CCTGCTGCCC
CTGGGCGAGC GCTTCCAGCA CGCCTCGGTT GAAACCCAGG GCGCCACGGC GCACCCGGTG
CCGGCGCCCC GTCCGGTGAC CGGCCCCGCC CCCGGCCACC TCCGCGTGGC GGTCTGCGGT
GCCCACATGC AGGGGCTGCC GCTCAATCAC CAGCTCACCG AGCGCGGCGC CCGGCTGGTG
GCAAAGACCC GCACCAGCCC CCACTACCGC TTCTACGCCC TGGCCGGCGG CCCGCCCTGG
CGCCCCGGAC TGGTGCGCGA TGCCGGCGGG CAGGCCATCG AGGTGGAGGT CTGGGAACTG
CCCGCGGCCC ACTTCGGCAG CTTCGTGGAC GGCATCCCCG CGCCGCTTGG CATCGGCCGG
GTGGAACTGG CCGATGGCAG CCGTGTGGCC GGCTTCCTGT GCGAGCCCCA CGGAGTGGCC
GACGCCCGGG AGATCACCCA CCTGGGCGGC TGGCGCGCCT ACCTAGGAGC CTGTCGGACC
GAATTGATCA CAGACAGTGC ACGCGCCGGT GCGGATGGCC TATAA
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| Protein sequence | MKHPHLSLDI DSLHRAYREG RLTPAELIDE VLARIAAQPD RHEWIRVLDR DALMAHAARL
EGESPDTLPL YGIPFAIKDN IDLAGVPTTA ACPAFAYTPE HSAFVVERLI EAGALPIGKT
NLDQFATGLV GTRSPYGACA NAFDPAYISG GSSAGSAVTV ATGVVSFSLG TDTAGSGRVP
AAFNNLIGVK PTRGLLSASG VVPACRSLDT VSIFALTVPD AERVLAVTAA FDAHDAYARP
RPLTTHGFDP ARFRFGVPRA EQLQFFGNAE AERLFHEAVA RLQSLGGTRV EIDFAPFLDA
ARLLYEGPWV TERYLATQPL IDEAPGELLA VTRGIIGGGA APRATDCFRA QYRLMDYKRQ
AEAAWQAVDV LVTPTAGTIY TIAQVNADPV RLNSNLGYYT NFMNLLDLAS LAVPAGFQAD
GLPFGITLIA PAFGDGALLP LGERFQHASV ETQGATAHPV PAPRPVTGPA PGHLRVAVCG
AHMQGLPLNH QLTERGARLV AKTRTSPHYR FYALAGGPPW RPGLVRDAGG QAIEVEVWEL
PAAHFGSFVD GIPAPLGIGR VELADGSRVA GFLCEPHGVA DAREITHLGG WRAYLGACRT
ELITDSARAG ADGL
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