Gene Tgr7_3086 details

Gene Information

• Locus tag: Tgr7_3086
• ID: 7316016
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 3232335
• End bp: 3232787
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643617985
• Product: putative transcriptional regulator, CopG family
• Protein accession: YP_002515142
• Protein GI: 220936243
• COG category: [K] Transcription
• COG ID: [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain
• TIGRFAM ID: [TIGR02793] nickel-responsive transcriptional regulator NikR

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.817448
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCCA ACGGAGGCGT CAGCCGCATC AGCATCTCCC TGCCCGAGCC CCTGCTCGGG 
CAGCTGGACG ACATGGTGGA GGCGCGCGGT TACGAGAGCC GTTCCGCGGC GCTGGCGGAG 
ATGATCAGCC ACCAGTTGGT GGCCCACAAA CGGGAACTGG GCAACGAGGT GATGGCCGGC 
ACCATCACCC TGCTCTACGA CCACAGCACG CCGCGCCTGC AGAAGGTCCT CGCGGACCTG 
CAGCACGAGC ACGTGGAGGA GGTGATCAGC TCCCTGCACA TCCACCTGAT GCACAACCGC 
GCCATGGAGG TGATCCTGGT GCAGGGCCCG GCGACCCAGC TGCAGGTCAT CGCCGACCGC 
ATGATCACCA ACCGGGGTGT GATCTCCGGC AAGCTGGAAC TGACCACCAC CCTCATCCCC 
CAGGTGCACC AGCCGCCCGC CCGTGGCAAC TGA 

 

Protein sequence

MKANGGVSRI SISLPEPLLG QLDDMVEARG YESRSAALAE MISHQLVAHK RELGNEVMAG 
TITLLYDHST PRLQKVLADL QHEHVEEVIS SLHIHLMHNR AMEVILVQGP ATQLQVIADR 
MITNRGVISG KLELTTTLIP QVHQPPARGN