Gene Tgr7_3029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_3029 
Symbol 
ID7315957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp3170883 
End bp3171455 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content64% 
IMG OID643617927 
ProductShikimate kinase 
Protein accessionYP_002515086 
Protein GI220936187 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.194702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGA CCAGCAACAT CATCCTCATC GGCCCCATGG GCGCTGGCAA GTCCACCATC 
GGACGCCAGC TGGCCGCTGC CCTGCACCTG CCCTTCCGGG ACAGCGACAA GGAGATCGAG 
AAGCGCACCG GGGTGGATAT CCCCACCATC TTCGAATTCG AGGGTGAAGA GGGTTTCCGC 
AACCGGGAGT CCGCCATGCT CGAGGAGTTG TGCACCGAGC AGGGCATCGT GCTGGCCACC 
GGCGGCGGCG CGGTGATGCG GCCGCAGAAT CGCGCCCTGC TCAGGGACTG CGGCCTGGTG 
GTTTACCTGA AGACTTCTGT CAAGACCCAG TTGCGCCGCA CTGCCCGGGA CCGCAACAGG 
CCTCTGCTGC AGACGGAAAA CCCCCGCGCC CGGCTGGAGG AGCTCATGCG CATCCGCGAC 
CCCCTGTACC GGGAGATCGC AGAGCTGACC GTGGATACCG ACCGGGATTC CATCCGCAAA 
GTGGTGCAGG AGATCTCGCG GTACTACCGC ATGAATAACA AGGACAGTAT TCCACAGGAC 
GACAGCAACA CAGAACCACA GGGCGACGGC TGA
 
Protein sequence
MTQTSNIILI GPMGAGKSTI GRQLAAALHL PFRDSDKEIE KRTGVDIPTI FEFEGEEGFR 
NRESAMLEEL CTEQGIVLAT GGGAVMRPQN RALLRDCGLV VYLKTSVKTQ LRRTARDRNR 
PLLQTENPRA RLEELMRIRD PLYREIAELT VDTDRDSIRK VVQEISRYYR MNNKDSIPQD 
DSNTEPQGDG