Gene Tgr7_3026 details

Gene Information

• Locus tag: Tgr7_3026
• ID: 7315954
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 3167525
• End bp: 3168112
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643617924
• Product: Pilus assembly protein PilO
• Protein accession: YP_002515083
• Protein GI: 220936184
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3167] Tfp pilus assembly protein PilO

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACCTCC AGGATCTGAA CAACATTGAC CTCAAGACCA TTGGCACGGC CCCAGCCGCG 
GTCAAAGGGA TTGCCATTGC CATCGTGGTC ATCGCCATCC TGGGCGTCGG GTACTGGTTC 
GTCATCAAGG ACCAGCTGGA ACAACTGGAC CGGGTACAGG CCCAGGAAAC CCAGCTGCGC 
CAGACCTTCG AGACCCGCCA GCGCCGCGCC GCCAACCTGC AGGCCTACAA GGATCAGCTG 
GAGGAAATGC AGCGCACCTT CGGCACCATG CTGCGCCAGT TGCCGAGCCG CACCGAGATC 
CCCAGCCTGC TGGTCGACAT CTCCCAGACA GCATTGGCCA GCGGCCTGGA GATCGACCTG 
TTCCGCCCCC AGGCCGAACA GCGCCGCGGC TTCTATGCCG AAGCCCCCAT ACAGCTGCGC 
ATGCATGGTA GCTACGAACA GATGGCCGAA TTCACCAGCG GCGTAGCCAG CCTGCCGCGC 
ATCGTGACCC TGCACGACGT GGTGATCCGC CCTACACAGG ACGGCACCCG GCTGACCATG 
GAAGCCACCG CCAAGACCTA CCGCTACCTG GATGAGACCG ATGGCTGA 

 

Protein sequence

MNLQDLNNID LKTIGTAPAA VKGIAIAIVV IAILGVGYWF VIKDQLEQLD RVQAQETQLR 
QTFETRQRRA ANLQAYKDQL EEMQRTFGTM LRQLPSRTEI PSLLVDISQT ALASGLEIDL 
FRPQAEQRRG FYAEAPIQLR MHGSYEQMAE FTSGVASLPR IVTLHDVVIR PTQDGTRLTM 
EATAKTYRYL DETDG