| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3024 |
|---|
| Symbol | |
|---|
| ID | 7315952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 3165764 |
|---|
| End bp | 3166267 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643617922 |
|---|
| Product | Fimbrial assembly family protein |
|---|
| Protein accession | YP_002515081 |
|---|
| Protein GI | 220936182 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3166] Tfp pilus assembly protein PilN |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.886135 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCATA TCAACCTGCT CCCGTGGCGC GCACAGCGGC GCAAGGAACA GCAGAAGGAA
TTCGGCATCC TCGCGGGCGT CGCCGCCGCG GTCGCCGCGC TGGCCGTATT TCTGGGTCAT
ATCCATGTCA ATGGTCTGAT CGAGCATCAG CAGGCACGCA ATGCCTTCCT GCAGAACGAG
ATCCGCATTC TCGACCGCCA GATCGCCGAG ATCCGCGACC TTGAAGCCAC CAAGAAGGCG
CTGATCGACC GCATGACCAT CATCCAGGAG CTGCAGAGCA GCCGCCCGGT GGTGGTCAGG
TTGTTCGACG AGCTGGTGGT GCAGTTGCCC GACGGCACCT TCTACACCGC CATAGAGCAG
CGCGGCAACA ACCTGACGCT GCGCGGCCGG GCTGAGTCCA ACGCACGCAT CTCCGCCATG
ATGCGCAACC TGGAGGCATC CCCCTGGTTC GGGGAGCCCA GCCTTCAGGT GATCGAAACC
CGGGAACAGC AAGGGAAACT CTGA
|
|---|
| Protein sequence | MSHINLLPWR AQRRKEQQKE FGILAGVAAA VAALAVFLGH IHVNGLIEHQ QARNAFLQNE
IRILDRQIAE IRDLEATKKA LIDRMTIIQE LQSSRPVVVR LFDELVVQLP DGTFYTAIEQ
RGNNLTLRGR AESNARISAM MRNLEASPWF GEPSLQVIET REQQGKL
|
|---|
| |