Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_3011 |
Symbol | |
ID | 7318308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 3151917 |
End bp | 3153059 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643617909 |
Product | Cytochrome-c oxidase |
Protein accession | YP_002515068 |
Protein GI | 220936169 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.913445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGCCA CCAAGCGATC ACGATCCAGA TCCCTTCTTG CCGCTGCCCT GGCGGTCACC GGTTTCGGTG CCACTGCGGC CGCGGACGAG GTGCAGCGTT GGGGAATCAA CTTCCCCCCG CCGGCTTCCA CCACGGCGCA GGAGATCTAT GACATTCACA TGCTCACCAT GGGCATCGCC ACGATCTTGC TGGTGATCAT CTTCGCCGTG GTGATCTACT CCCTGATCGT TCACCGCAAG TCCCGGGGCT ATCCCGCCGA CCAGCGTTTC CATGAAACCT GGTTCGGTCG CTGGTCCTGG GTGTTCGTGC CCGTGATGGT GCTCGGGGTG GACCTGACCA TTGCCGGCGC GGCCCAGAAG ACCCTCGAGC GGGTCTGGGT GGTGCCCCAG GATCAGCCGC TCCTGGATGT GAAGGTGATC GGTCACCAGT GGTACTGGGA GTTCGTCTAC CTGGATCACG ACGTGAAGAT CGAGAGCCGC TACGTGCCCA AGGAGGAGGC GGGCATCCAC TACCTGCGTG AAGTGGATAA CCGGCTGGTG CTGCCGACCC ACCAGCGGGT GCGTTTCCTG CACACCGCCA GTGACGTGCT GCACGCCTTC TGGGTCCCCG AGTTGGCCGT GAAGAAGGAC GCCATTCCGG GCTATGTCAC CGAGACCTGG GTGAACCTCA CCCGTGAAGG CGTGTTCCGC GGCCAGTGTG CCGAGCTGTG CGGCACCTGG CATGCGCGCA TGCCCATCGT GGTGGAGAGT GTCTCCCAGG AACGTTTCGA CGCCTGGATC GAGGAGCAGA AGCAGGTCAA GCTGGCTGCA CTGGCCGAGG CGACCGCCGA GCGTGAATGG GACAAGGACG AGCTGATGGC CCGCGGGGAA AGGCTCTACA ACACCATGTG TGCCGCCTGC CATCAGGCGG ATGGTTCCGG CATGCCACCG GCCTTCCCGG CCATCCGGGG CAGTGCCGTG GCGACGGGTC CCATCCCCCG CCACATGGAG GTCGTCCTCA AGGGCGTCCC GGGCACCGCC ATGGCTGCCT GGAATTCCCT GAACGATCTG GAGATCGCAT CCATCATCAC CTACCAGCGC AATGCCTGGG GTAACGATAC CGGTGACGTG GTCCAGCCCT CCGACGTGAA TGCCGCGCGC TGA
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Protein sequence | MLATKRSRSR SLLAAALAVT GFGATAAADE VQRWGINFPP PASTTAQEIY DIHMLTMGIA TILLVIIFAV VIYSLIVHRK SRGYPADQRF HETWFGRWSW VFVPVMVLGV DLTIAGAAQK TLERVWVVPQ DQPLLDVKVI GHQWYWEFVY LDHDVKIESR YVPKEEAGIH YLREVDNRLV LPTHQRVRFL HTASDVLHAF WVPELAVKKD AIPGYVTETW VNLTREGVFR GQCAELCGTW HARMPIVVES VSQERFDAWI EEQKQVKLAA LAEATAEREW DKDELMARGE RLYNTMCAAC HQADGSGMPP AFPAIRGSAV ATGPIPRHME VVLKGVPGTA MAAWNSLNDL EIASIITYQR NAWGNDTGDV VQPSDVNAAR
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