Gene Tgr7_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_3008 
Symbol 
ID7318305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp3149535 
End bp3150083 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content64% 
IMG OID643617906 
Productcytochrome c oxidase assembly protein 
Protein accessionYP_002515065 
Protein GI220936166 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3175] Cytochrome oxidase assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.732509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGGG ATCCGGATGT GCGCAAGGGC AGCGGCCGCA TGGTGCTCTG GCTGGGCGCC 
TTGACCATCG GGATGTTCGG CTTCGGTTTT GCCCTGGTGC CCCTGTACAA CCTGTATTGC 
CAGGTGGTCG GCATCCAGTC CGCCGATCAG CAGAGGGCGC TCAACGTGCA GGCCAGGGTC 
GACCCGCTGG GCGAGGTGCA GGACCGCTGG GTGACGGTGC GTTTCGATAC CACCGTGCAT 
CCGAGCCTGC CCTGGGCCCT GGAGTCGAAC GAGCGCAGCC TGCGTGTGAG GCCGGGCGAG 
ATGCACGAGG TGATGTTCGT GGCCAGCAAT CGCTCCTCGG CCAAGGTCAC GGGCCAGGCG 
CTGCCCACGG TCATCCCGTG GCAGGCCAAT GACTTCTTCA ACAAGACGGA ATGTTTCTGC 
TTCGTGAAGC AGACCCTCGA CGGCGGGGAG AGAAGGGAGA TGCCATTGCG TTTCGTGGTG 
TCGCCGGCAT TGCCTGACGG GGTGACCTCG CTGACCCTGT CCTACAACTT CATGCACCTG 
GATGGTTGA
 
Protein sequence
MERDPDVRKG SGRMVLWLGA LTIGMFGFGF ALVPLYNLYC QVVGIQSADQ QRALNVQARV 
DPLGEVQDRW VTVRFDTTVH PSLPWALESN ERSLRVRPGE MHEVMFVASN RSSAKVTGQA 
LPTVIPWQAN DFFNKTECFC FVKQTLDGGE RREMPLRFVV SPALPDGVTS LTLSYNFMHL 
DG