| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3005 |
|---|
| Symbol | |
|---|
| ID | 7318302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 3147526 |
|---|
| End bp | 3148263 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643617903 |
|---|
| Product | surfeit locus 1 |
|---|
| Protein accession | YP_002515062 |
|---|
| Protein GI | 220936163 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3346] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.394184 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCGG GTAAGTATGA ATTCCGGATC CGCCCGCTAC CGACACTCAT CATGCTGATA
CTGGTCACGT TGTTTTCGAG CCTCGGTGCC TGGCAGTTGG AGCGCGCTGA ATACAAGCGT
GAGCTCGCGC GCAGCATGGA TGAGCGCAAC GCACTTCCGC CCGTCAGTCT CGTGAATGCT
CAGGTCGATC CCGAGGAACT GCGTTATCGC CATGCACAGG CCTTGGGGGT TTTTGATGCG
GACAGCCAGT TTTTCATTGA AAACCGCAGG CACGGCAGCC GCACCGGTTT CCATGTGATC
ACGCCGCTGC GGCTCGCAGA CAGCGATGCG CTGCTGCTGG TCAATCGGGG CTGGGTCGAG
GCCCCGCCCG GAGGCGGTCT TCCCGAGGCG CCAGTGCCGG AGGGCGAAGT GTCGGTCACA
GGCATGGTCT ATGAGCCTTC GCCTCCTGCG ATCACCCTGC ACGCCGGACC GCAAGCCGCC
AGGGACTGGG GCAGCCGCTG GCCCTACATG ACCGTGGAGT TGTTCCGTGC CACGGTGGAT
TCGCCGGTCG TCCCCATGCT GCTGCTTCTG GATCGAGGAG TGCCCCATGG TTATGTCCGT
GATTGGCCCC GCGAAGAGCC CAAGGTGGGC ATGCATATCG GTTACGCGAT CCAGTGGTTT
GCCTTCGCCC TGATCGTGAT TGTCATCTAT CTGCGCCTGA GTCTGAGCGC CAAAGCCGTG
ATGAGGGAGG CTCAATGA
|
|---|
| Protein sequence | MTAGKYEFRI RPLPTLIMLI LVTLFSSLGA WQLERAEYKR ELARSMDERN ALPPVSLVNA
QVDPEELRYR HAQALGVFDA DSQFFIENRR HGSRTGFHVI TPLRLADSDA LLLVNRGWVE
APPGGGLPEA PVPEGEVSVT GMVYEPSPPA ITLHAGPQAA RDWGSRWPYM TVELFRATVD
SPVVPMLLLL DRGVPHGYVR DWPREEPKVG MHIGYAIQWF AFALIVIVIY LRLSLSAKAV
MREAQ
|
|---|
| |