| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3003 |
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| Symbol | |
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| ID | 7318300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3145984 |
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| End bp | 3146892 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643617901 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_002515060 |
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| Protein GI | 220936161 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.523448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATCG CTGATCTGAC GCTGTCCAAG TCCCACGCAG GGTCGTGGCG CCGCTACTAC
GAGCTGGGCA AACCCAAGGT GGTTGCGCTC ATCCTGTTCA CCGCCCTGGT GGGGATGCTG
CTGTCGGTGC CCGGCATGGT GCCCTGGCAC ACCATGCTGT TTGGTCTGCT TGGCATCGGG
CTGGCCGCGG CCTCGGGCGC GGCCCTCAAT CACGTCATCG ACCGGCGCAT CGATGCGGTG
ATGGACAGGA CCCGCAACCG CCCGCTGCCC ACCGGACAGC TGGAGACCCA GAAGGCCCTG
GTCTTTGCCA TTGCCATGGG CGTGGTGGCC ATGGGGATCC TGGTGCTCGC CGTCAACGTG
CTGACCGCGG TGCTGACCTT CTTTGCGCTG ATCGGCTACG CGGTGATCTA CACCGTCTTC
CTCAAGCGTA CCACGCCCCA GAACATTGTC TGGGGTGGTC TGGCGGGTGC GTTGCCGCCG
CTGCTGGGCT GGGTCGCGGT CACCGGCCAG ATCACGGTGG AGCCGCTGCT GCTGGTGCTG
CTCATCTTCG TCTGGACGCC ACCCCATTTC TGGGCCCTGG CCATTCGACG CCGGGAAGAC
TATGCCCGGG CCGGCATCCC CATGTTGCCG GTCACCCACG GCGTGGCGTT CACCAAGCTC
CAGGTGCTGC TCTACACCCT GATGCTGCTG ACCGTGTCAC TGGTGCCCTT CATCATTCAC
ATGACCGGCC TGATCTATCT GGTCGGTGCC CTGGCGCTGG GTATCGGTTT CGTATTCCAT
GCCTACCGCC TGTGGCGCAG TCCCGATGAC CGCTACGCCA TGCCCACCTT CGGCTACTCG
ATTTTCTACC TGACCGCCAT GTTCGCCCTG CTGCTGGTGG ATCACTACGT GCGCATGATG
ATGGCCTGA
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| Protein sequence | MAIADLTLSK SHAGSWRRYY ELGKPKVVAL ILFTALVGML LSVPGMVPWH TMLFGLLGIG
LAAASGAALN HVIDRRIDAV MDRTRNRPLP TGQLETQKAL VFAIAMGVVA MGILVLAVNV
LTAVLTFFAL IGYAVIYTVF LKRTTPQNIV WGGLAGALPP LLGWVAVTGQ ITVEPLLLVL
LIFVWTPPHF WALAIRRRED YARAGIPMLP VTHGVAFTKL QVLLYTLMLL TVSLVPFIIH
MTGLIYLVGA LALGIGFVFH AYRLWRSPDD RYAMPTFGYS IFYLTAMFAL LLVDHYVRMM
MA
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