Gene Tgr7_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_3000 
Symbol 
ID7318297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp3141749 
End bp3143239 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content62% 
IMG OID643617898 
Productcbb3-type cytochrome c oxidase subunit I 
Protein accessionYP_002515057 
Protein GI220936158 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3278] Cbb3-type cytochrome oxidase, subunit 1 
TIGRFAM ID[TIGR00780] cytochrome c oxidase, cbb3-type, subunit I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0591739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCATT CCACGACCAT GGCTGGCGCG CACGCCGCTA CAGGCGTTGC CTCAGCCGAG 
CAGTACAACT ACGAAATCAT CAAGAAATTC GCCATCATGG CCCTGATCTG GGGCGTGCTG
GGCATGAGTG TAGGCACCTA CATCGCCGCC CAGCTGGCGT TTCCCTTCCT GAATTTCGAC
ATCGCCGAGA TCAGCTTCGG GCGCTTCCGT CCGGTGCACA CCACCCTGGT GATCTTCGGC
TTCGGTGGTA ATGCCCTGTT CGCCACCTCC TACTACGTGG TGCAGCGCAC CTGTCAGGCC
CGCCTCTACA GCGACTCCCT GGCCACCTTC ACCTTCTGGG GCTGGAACAT CTCCATCGCC
CTGGGCGTGG TGACCTACAT GCTGGGCTAC ACCCAGGGTC GTGAGTACGC CGAGTTCGTC
TGGCCCATCG ACATCCTGAT CGCCGTCACC TGGGTGGTCT ACTTCTGGGT GTTCCTGCAG
ACCCTGCTAC GCCGCTCCCA GCCGCACATC TACGTGGCCA ACTGGTTCTA CATGGCCTTC
ATCCTGGCCA CCGCCCTGCT GCACATCTTC AACAACCTGC AGGTGCCCGT GAGCCTGTTC
AGCCTGGAGT CCTACTCGCT GTTCTCCGGT GTGCAGGACG CCATGACCCA GTGGTGGTAC
GGCCACAACG CGGTAGGCTT CTTCCTGACC GCGGCCTTCC TGGGCATGAT GTACTACTTC
GTGCCGAAGC AGGCGGGCCG TCCGATCTAC TCCTACCGGC TGTCCATCAT TCACTTCTGG
GCGCTGGTAT TCCTGTACAT GTGGGTGGGC GCCCATCACC TGCACTGGAC CGCGCTGCCC
GACTGGGTCT CCACCCTGGC GGCCACCTTC TCCATCCTGC TGCTGCTGCC CTCCTGGGGC
GGCATGATCA ACGGCGTCAT GACCCTGTCC GGCGCCTGGG ATAAGCTGCG CACCGACCCG
ATCATGCTGT TCCTGATCAC CGCGCTGTCC TTCTACGGCA TGTCCACCTT CGAGGGTCCG
ATGATGTCCC TGAAGAGCGT GAATGCCCTG TCCCACTACA CCGACTGGAC CGTGGGCCAC
GTGCATTCCG GCGCCCTGGG CTGGGTGGCC ATGATCTCCT TCGGCTCCCT GTACCACCTG
ATCCCGCGCC TGTGGAACAC CAAGCTGTAC AGCCTGAAAC TGGTGTACGT GCACTTCTTC
CTGGCCACCA TCGGCATCGT GCTCTACATC ACCGCCATGT GGGTGGCCGG TATCGGCCAA
GGCCTGATGC TGCGCGCCTT CGACGAGTAC GGCAACCTGG CCTACACCTT CGTCGAGTCC
GTGGTGTTCC TGCACAAGCC CTACGTGGTG CGCATGATCG GAGGCATGTT CTTCGTCACC
GGCATCGTGA TCATGGCCTA CAACATCTAC ATGACCGTCA CCGCCGCCCG CCGTGAAGCG
GCCCGTGCGG AAGCGAAGAT CGCCGCCAAG ATGGCCGGCG CCTCTTCCTG A
 
Protein sequence
MAHSTTMAGA HAATGVASAE QYNYEIIKKF AIMALIWGVL GMSVGTYIAA QLAFPFLNFD 
IAEISFGRFR PVHTTLVIFG FGGNALFATS YYVVQRTCQA RLYSDSLATF TFWGWNISIA
LGVVTYMLGY TQGREYAEFV WPIDILIAVT WVVYFWVFLQ TLLRRSQPHI YVANWFYMAF
ILATALLHIF NNLQVPVSLF SLESYSLFSG VQDAMTQWWY GHNAVGFFLT AAFLGMMYYF
VPKQAGRPIY SYRLSIIHFW ALVFLYMWVG AHHLHWTALP DWVSTLAATF SILLLLPSWG
GMINGVMTLS GAWDKLRTDP IMLFLITALS FYGMSTFEGP MMSLKSVNAL SHYTDWTVGH
VHSGALGWVA MISFGSLYHL IPRLWNTKLY SLKLVYVHFF LATIGIVLYI TAMWVAGIGQ
GLMLRAFDEY GNLAYTFVES VVFLHKPYVV RMIGGMFFVT GIVIMAYNIY MTVTAARREA
ARAEAKIAAK MAGASS