Gene Tgr7_2983 details

Gene Information

• Locus tag: Tgr7_2983
• ID: 7318280
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: -
• Start bp: 3122077
• End bp: 3125511
• Gene Length: 3435 bp
• Protein Length: 1144 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643617881
• Product: Small-conductance mechanosensitive channel-like protein
• Protein accession: YP_002515040
• Protein GI: 220936141
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3264] Small-conductance mechanosensitive channel

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCCTCC CGTCGAAGAC CTTGCAACGT CTCCTGATCC TAGCCGTTCT GCTGCCCTGG 
TTCGCGTTCG CCACGGCACA GGACATGAAC GGGGCCGTTG GCCCTGCCAT GCCGGCGGTT 
TCGCCCCAGC AGCTGCTGGA GCTGCGCGCC ACGCTCCAGG ACAACCGCCC GCGCCTGGTG 
CAGATGGCGG AGATGATCGA CACCACCCAG GCAGAGGGCT GGCTGGAGGC CAGTCCGGCG 
TCGCGCTTTG CCGAGCGCAT GGCGGCCACG GCCGAGGACT CCGCGGAGCG TGGCATGTGG 
CAGGCAGCCA TCGACCTGGA GACGGAAGGG GCCGAGCGTC TGCGCGGCGC CCTGGAACGG 
GCGGCACTGG CCCGCTCAGC GGGAGAGCGC ATCGACGAGG CCGTGCAGCG CATCACCCTG 
ATGCTCGGCA CCCAGCCGCG CACCGGTGAC GACACCAGCC TGTCCGCCAT CGAGGCGGAT 
ATCGCGACCC TGGAGCGGCG TCGCGCCCAG GTGTTGCTGG AGCAGGAACA GAAGCGCCAG 
ACCCTGGAGC GCCTGGACAC CCAGGCGCGT ACCCAGGCGG AACTGCTGGA GCGCCTGCGC 
CAGGGGCTCG CGGACGGCCC TGTGGCCATG CCTTGGGGGC CGCTGGAGGA AACGGCACTC 
TCAGATGCCC TGGCCGCCTG GGAGCAGGCC CAGGCGAGGC GGGCAGAGGC GCGCCTGCTC 
GCGGCGCAAC TGGACGGGCA GACGGTCGCG CCACGCACGG AGATCCTGCG CCTTGAGCTG 
CGCGTCCTGG AGACCGAGGT GCAGTGGCTG GCCCAGCGCG TCGCCCAGAT GTCCACCGAG 
TATGCGGAGC GTTCCGGTGA GGAACTGCGC GCCCTGCGTG ACGATATCCG GCGCCTGACG 
GAGCGCGAAC CCGAGGCCGC GCAACGCTTC AGCACCGAGA TCGAGGCCCT GCTCAAGCGC 
ATCGACCGTA TCGCCCAGGT CCAGTCCCGT GTGCGTGCGC TGCAGGTCGA GCGGGAGCGC 
TACACTCAGC TGGAGGCCGA CCTCACCCAG ACCCTGTCCG GCGTCCGTGA GCGCCTGGAG 
ATCGGCGGCC TGACCGATGT GCTCGGTGGC CTGCTCATGG AAGAGGAGCG GCGGGTTCGC 
AAGCTCGCGG ATCTGCGTTT CACGCTGCAC GATCTGGAGC GGGAGCTGGC CCAGTCTCGG 
CTGCGCGATA TCACCGTGCG CGACGAGTTG CGCGCACTGC CGGCGCCGGC GCCGGTGTTC 
ATCGATGACC GTGCCCGCTT CGAGATCCTG CGCCTGCAGC GCCAGGTGAT CGAGATCGAG 
CTGCAATCCG ATGAACAGCT GACCGAACAG CTGCGCAATG CCGAGCTGCG GCTGCGCACC 
GTGGTGGAGC GCGTGGACGA GTTGACCGAG GTCCTGCGCG AGTCGCTGCT CTGGTGGCCC 
AGCCATCAAC CCGTCGGGCT GGAGTGGGCC AAGCGCATTC TTCCGGCCAC GCTGATCCTG 
CTGGACCCCG GTGCCTGGCG CGAGATCCAC AGCGCCCTGT TCTCGGTGAT CTTCGGCGCA 
CCGGTGGGTA CCCTGCTGAC CCTGCTCCTG GCGGCGCTGC TGTTCCTGGG CGGGCGCGGC 
ACCCACCAGC AACTGGCGCA GATCGCGGAG AAGACCGCGC ATCCCTTCAG TGATCGCATG 
GGGTTGACCT TCCAGGCGGT GGGCTGGAGT CTGCTGCGCG TCCTGCCCGT GCCGGTGTTG 
CTGGCCTCCA CCGGTTATCG CCTGCAGCAG CTGCCGGATA TCGGTCCGGG CGTGGAGGTG 
TTGGCCGTGG TGCTGTTCGG TGCCGCGCTC TGGTGGCTGG TGGGTCACCT GTTCCTGCTG 
TTCTCCAGTA GCAAGGGCGT CGGCATGGCC CACTTCCAGT GGGACCCGCT GGTGGTGCGC 
CGCCTGCGCC GGCACCTGAC CTGGTACATG CCGCTGTTGC TGCTCATGGC GGCGTTCCTG 
GCCCTGACCT TCGGTCACCC GAACGAGCTG CTGCCCGATG TGTTCGGCCG CATCGGTCTG 
CTGGCGACGA CCTTCCTGTC CGGCCTGTTC GCCTGGCAGA TGCTGGCACC GAGGACGGAG 
TCCGAGGCGA CCGAGCAGCA GGAGCGCCGG CGTCGCCTGG TGCGTTTCGC GCTGGCGGCG 
TTCACCCTGG TGCTGATGGG CCTCACCCTG GCCGGCTACC TGCTCACCGT GGCGGTGCTG 
CTGGACCGCA CCATCAACAC GGTGATCGTG GTGGCCGCCG TATGGCTGGG CTACAGCTTC 
GCGACGCGGG CGCTTCTGCT CAGCGAATCC CGACTGGTCC TGCGCCGCAT GCGCGAACAG 
CGGGAAAAGG CCGCGGCCCT GGAGGGCAGC GCGGCCGTGG GCGAGGGCGC GGTGCTCGAC 
ATGCCCGAGC CCCATCTGAG CCTGGAAAAC ATCAATCAGC AGACCCGCTC GCTGCTGCGG 
GTCACCGCGG GCGCGGCCCT GGTGCTCGGA CTGTTGTGGG TCTGGGCGGA GATCCTGCCC 
GCGCTCACCT GGCTGGAGCG CGTGACCCTG TGGTCACGCA CCATCGCCGT GGGTGATGCC 
GAGATCCTGA GTCGCGTGAG CCTGCAGGAC TTCCTGCTGG CGATCTTCCT GGGCGTGATC 
TTCACCCTGG CGGCGCGCAA CCTGCCGGGC CTGGTGGAGA TCCTGCTTTC GCGCAGCACC 
CAGATGGACG CCTCGGACCG CTACACCGTG ACCACCCTGC TGCGCTACGT GCTGGCGGTG 
ATCGCGGTGA TCAGCGTGTT CTCCCTGCTG GGCCTGCGCT GGAGCGAGCT GCAGTGGATG 
GTCGCGGCCC TGACCCTGGG CCTGGGCTTC GGCCTGCAGG AGGTGGTGGC CAACTTCGTC 
TCGGGCATCA TCATGCTGTT CGAACGCCCG GTGCGCGTCG GCGACACCAT CACCATCGGT 
GAATACAGCG GCACCGTGGC GCGCATCCGC ACCCGCGCCA CCACCATCGT CGACTGGGAC 
AACCGGGAGA TCGTGGTGCC CAACAAGAAC TTCATCACCG AGCGCCTGAT CAACTGGACC 
CTCTCAGACA CCATGACCCG CATCGTGATC CCGGTGGGCG TGAGCTACGA TGCCGACGTG 
GACGAGGTGA TGGGCACCCT GAAGACCATC GCCGAAGAGA GCCCGCTGGT ACTCAAGGAG 
CCGGCGCCGA CCGTGTTTTT CCTGAAGTTC GGTGACAGCG CCCTGAGCTT CGAGCTGCGG 
GTCTACGTCA ATGCGATGAA GGACCGGCTG ATCACCATCA GTGAGCTGCA CCGGAGCATC 
ATCAAGTCGT TCCGCGACAA GGGCATCGAG ATCGCCTACC CGCAGATGGA CATCCACGTG 
CGCGACCTGC CCCCGGCCAA GCGCGCGGGT CAGGGGCACC CGGAACCGCC CAGGCCGGAT 
CCGCAGGCGA CCTGA 

 

Protein sequence

MRLPSKTLQR LLILAVLLPW FAFATAQDMN GAVGPAMPAV SPQQLLELRA TLQDNRPRLV 
QMAEMIDTTQ AEGWLEASPA SRFAERMAAT AEDSAERGMW QAAIDLETEG AERLRGALER 
AALARSAGER IDEAVQRITL MLGTQPRTGD DTSLSAIEAD IATLERRRAQ VLLEQEQKRQ 
TLERLDTQAR TQAELLERLR QGLADGPVAM PWGPLEETAL SDALAAWEQA QARRAEARLL 
AAQLDGQTVA PRTEILRLEL RVLETEVQWL AQRVAQMSTE YAERSGEELR ALRDDIRRLT 
EREPEAAQRF STEIEALLKR IDRIAQVQSR VRALQVERER YTQLEADLTQ TLSGVRERLE 
IGGLTDVLGG LLMEEERRVR KLADLRFTLH DLERELAQSR LRDITVRDEL RALPAPAPVF 
IDDRARFEIL RLQRQVIEIE LQSDEQLTEQ LRNAELRLRT VVERVDELTE VLRESLLWWP 
SHQPVGLEWA KRILPATLIL LDPGAWREIH SALFSVIFGA PVGTLLTLLL AALLFLGGRG 
THQQLAQIAE KTAHPFSDRM GLTFQAVGWS LLRVLPVPVL LASTGYRLQQ LPDIGPGVEV 
LAVVLFGAAL WWLVGHLFLL FSSSKGVGMA HFQWDPLVVR RLRRHLTWYM PLLLLMAAFL 
ALTFGHPNEL LPDVFGRIGL LATTFLSGLF AWQMLAPRTE SEATEQQERR RRLVRFALAA 
FTLVLMGLTL AGYLLTVAVL LDRTINTVIV VAAVWLGYSF ATRALLLSES RLVLRRMREQ 
REKAAALEGS AAVGEGAVLD MPEPHLSLEN INQQTRSLLR VTAGAALVLG LLWVWAEILP 
ALTWLERVTL WSRTIAVGDA EILSRVSLQD FLLAIFLGVI FTLAARNLPG LVEILLSRST 
QMDASDRYTV TTLLRYVLAV IAVISVFSLL GLRWSELQWM VAALTLGLGF GLQEVVANFV 
SGIIMLFERP VRVGDTITIG EYSGTVARIR TRATTIVDWD NREIVVPNKN FITERLINWT 
LSDTMTRIVI PVGVSYDADV DEVMGTLKTI AEESPLVLKE PAPTVFFLKF GDSALSFELR 
VYVNAMKDRL ITISELHRSI IKSFRDKGIE IAYPQMDIHV RDLPPAKRAG QGHPEPPRPD 
PQAT