| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2968 |
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| Symbol | |
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| ID | 7315404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 3106112 |
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| End bp | 3106930 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643617868 |
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| Product | nuclease (SNase domain protein) |
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| Protein accession | YP_002515027 |
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| Protein GI | 220936128 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00021469 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGGG CGCACGCACG GTGCGCCCTT TTTTTTGCCG CCCTGTTCGC CGCGCTGCTG
CTGGCGACAG CCCCCGCCCT CGCCCAGCTG CCGGAGAGCT GCCTGCCCCC GGGCCAGGAC
CATGGCAAGG CGCGGGTGGA CTTCGTCTAT GACGGCGACA CCGTCAGGCT GGTGGACGGG
CGGCGCATCC GCCTGATCGG CCTGGACACG CCGGAGTTCC ACCACCGGGA CGAGCGGCGC
GAGGCCGAGC CCTATGCCGT GGAGGCCCAC GAGGCACTCA AGGCGCTGCT CGCCGAGCAC
GGCCAGCAGG TGCTACTCGT CCACGACCGG CAGCGCCACG ACCGCTACCA GCGCACCCTC
GCCCATCTCT ACACCCCCGA CGGCCGGAGC ATCACCGCCC TGATGCTGCA GCAGGGCCTC
GGCACCCGCC TGACCATCCC GCCCAACGAC TGGAACGTGG ACTGCTACCG GGACGCGGAA
CGGGAGGCCG GCATCGCCCA GCGGGGCATC TGGTCCCTGA GCCAGAATAG CCTGTTCGAC
GCCACCGAAC TGCCCCGGGA CGCCACCGGC TTCCGGCGCG TGGAAGGCCG CGTGACGCGC
ATCGGCGAGA GCCCCCGGGC GATCTGGATC AACCTGGAAG GCGACGTGGC CCTGCGCATC
GACCGGGAGG ACCTGCAATT TTTCCCGGAT CTGGATGTCA CAAGCCTCAT GGATGCGCGG
GTACGGGGAC GCGGCTACGT CTATAATCAT CGCGGCCAGC TGCGCATCCG TCTGCGACAC
GCGGCGGACC TCGAGATCCT CGCCGTGAAC GGATCCTGA
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| Protein sequence | MQRAHARCAL FFAALFAALL LATAPALAQL PESCLPPGQD HGKARVDFVY DGDTVRLVDG
RRIRLIGLDT PEFHHRDERR EAEPYAVEAH EALKALLAEH GQQVLLVHDR QRHDRYQRTL
AHLYTPDGRS ITALMLQQGL GTRLTIPPND WNVDCYRDAE REAGIAQRGI WSLSQNSLFD
ATELPRDATG FRRVEGRVTR IGESPRAIWI NLEGDVALRI DREDLQFFPD LDVTSLMDAR
VRGRGYVYNH RGQLRIRLRH AADLEILAVN GS
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