| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2945 |
|---|
| Symbol | |
|---|
| ID | 7317051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 3087767 |
|---|
| End bp | 3088813 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643617845 |
|---|
| Product | A/G-specific DNA-adenine glycosylase |
|---|
| Protein accession | YP_002515004 |
|---|
| Protein GI | 220936105 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1194] A/G-specific DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAT CCGATTTCAG CCAACGCCTG CTCGCCTGGT TCGATCGCCA TGGCCGCCAC
GACCTGCCCT GGCAACAGGA CATCAACCCC TACCGGGTCT GGGTCTCGGA GATCATGCTG
CAGCAGACCC AGGTGGGCAC CGTGATCCCC TATTACCAGC GCTTCATGGC GCGCTTCCCG
GACGTGGCGA GCCTCGCCGA CGCGCCCCTG GACCAGGTGC TGCATCACTG GTCCGGGCTC
GGCTACTACG CCCGGGCCCG CAACCTGCAC AAGGCCGCCC AGGTGGTCCG CGATCAGCAC
GGCGGGCGTT TCCCCGAAGA CATCGAGGCC CTACAGTCCC TGCCGGGCAT CGGCCGCTCC
ACTGCCGGGG CCATCCTTGC GCTCGCCTGC GGGCAGCGCC AGCCCATCCT GGACGGCAAC
GTCAAGCGGG TACTGGCCCG GCACCGGGCC GTGGAGGGCT GGAGCGGCGA GACGGTGGTG
CTGCGCGATC TGTGGTGCCT GGCCGAGGCC CACACCCCCG CTGAACGGGT GGCCGAGTAC
ACCCAGGCCA TCATGGACCT GGGCGCCACG GTCTGTACCC GCAGCCGCCC CGCCTGCGGC
CGCTGTCCTG TCGCGGAAGA CTGCCGTGCG CGTCTCGAGG GCCGCACCGG CGAGCTGCCC
GCGCCGCGCC CGAAGCGTGT CCAGCCCCTG CGCGAGACCT GCATGCTCAT GGTCACCACG
CCGGAAGGGG TGCTGCTGGA ACAGCGCCCG GCGCGGGGGC TGTGGGGTGG ACTCTGGGGC
TTCCCCGAGG TGGATGACGA GGCATCGGCC CTGGCCTGGT GCCGCGCGTC CCTGGGCCTG
GAGCCGCAAC GGCTGGAGGC CTGGAATCCC TTCATCCACA CCTTCACCCA CTTCCGCCTG
CGCATCACCC CGCTGCGGGT CTCGTTGCAA GACCCTGCCG GCTGTGTGAT GGAAGCGCCC
GGGCGGGTCT GGTATAACAC CCGGACCTCA TCAGGCCTCG GGCTCGCAGC CCCGGTGGCC
CAACTGCTTG AAAAACTGGA TCTCTAA
|
|---|
| Protein sequence | MSASDFSQRL LAWFDRHGRH DLPWQQDINP YRVWVSEIML QQTQVGTVIP YYQRFMARFP
DVASLADAPL DQVLHHWSGL GYYARARNLH KAAQVVRDQH GGRFPEDIEA LQSLPGIGRS
TAGAILALAC GQRQPILDGN VKRVLARHRA VEGWSGETVV LRDLWCLAEA HTPAERVAEY
TQAIMDLGAT VCTRSRPACG RCPVAEDCRA RLEGRTGELP APRPKRVQPL RETCMLMVTT
PEGVLLEQRP ARGLWGGLWG FPEVDDEASA LAWCRASLGL EPQRLEAWNP FIHTFTHFRL
RITPLRVSLQ DPAGCVMEAP GRVWYNTRTS SGLGLAAPVA QLLEKLDL
|
|---|
| |