| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2919 |
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| Symbol | |
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| ID | 7317024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 3063522 |
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| End bp | 3064232 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643617819 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_002514979 |
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| Protein GI | 220936080 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.489919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACCA TTGGCGACAG ACTCGACACC GTCAGGACCC GTATCCATGA GGCCGCCCTG
CGTCATGGAC GCGACCCCGC CACGATCACC CTGCTGGCGG TGAGCAAGAC CCAGCCCGCC
GAGGCATTGA GGGAGGTCAT GGCCTGCGGT CAGCGGGCCT TCGGCGAGAA CTACGTCCAG
GAACTGGCCG ACAAGGCCGA TGCCCTCGCG GATCTGCGTC CCGAGTGGCA TTTCATCGGC
CCGCTGCAGT CCAACAAGAC CCGCCTGATT GCCGGCCTCG CCCACTGGGT GCACAGCATC
GAGCGGGACA AGATCGCCCG GCGCCTGTCG GAACAGCGCC CCGGGGAGGC CGTCGACCTG
CAGGTCTGCC TGCAGGTGAA CCTGGACGCG GAGGCGAGCA AGTCCGGGCT TGCCCCCGAG
GCCCTGCCGG CCCTGGCCGA AGTAGTGGCG GGACTTCCCC GGCTGCGCCT GCGCGGCCTG
ATGGCCATCC CCGCCCCCAG CGAGGACTTC GCCACCCAGC GACGCGCCTT TGCCCGCCTG
CGCGAGATGC AGGAAGACCT GATCCGCCGG GGCCATCAGC TGGATACCCT GTCCATGGGC
ATGAGCGGCG ACCTGGAGGC GGCCATCGCG GAAGGCGCCA CCATCGTGCG CGTGGGCACC
GCCATCTTCG GCAGCCGCCG GGTGGCAGGC CGCGGCGGGC AGGGTTTATG A
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| Protein sequence | MSTIGDRLDT VRTRIHEAAL RHGRDPATIT LLAVSKTQPA EALREVMACG QRAFGENYVQ
ELADKADALA DLRPEWHFIG PLQSNKTRLI AGLAHWVHSI ERDKIARRLS EQRPGEAVDL
QVCLQVNLDA EASKSGLAPE ALPALAEVVA GLPRLRLRGL MAIPAPSEDF ATQRRAFARL
REMQEDLIRR GHQLDTLSMG MSGDLEAAIA EGATIVRVGT AIFGSRRVAG RGGQGL
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