| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2917 |
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| Symbol | |
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| ID | 7317022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3061023 |
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| End bp | 3062189 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643617817 |
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| Product | twitching motility protein |
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| Protein accession | YP_002514977 |
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| Protein GI | 220936078 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.183371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGCG ATAAGGCAAT ACGTTTCATG CACGACTTGC TGAAGACCCT GCTCAGCAAG
AAGGGCTCCG ACCTGTTCAT CACCGTGGGT GCGCCGCCGT CCATCAAGGT GGACGGACGC
ATGACGCCCA TCACCAACCA GCCCCTGTCT CCGGCCCACA CCCAGGTGCT GGTGCGTTCC
ATCATGAATG ACAAGCAGGC CTCGGAGTTC GAACGCACCC AGGAGTGCAA CTTCGCCATC
AGCCTGCCGG GGGTATCGCG CTTTCGCGTC AACGCCTTCA CCCAGCGCGG CACCGCCGGC
ATGGTGCTGC GTGTGATCAC CACCGAGATT CCCACCTTCG AGCAGCTGGG CCTGCCGATG
CAGCTCAAGG ACATCGCCAT GACCCGCCGT GGCCTGGTGA TCTTCGTGGG CGGTACCGGA
TCGGGCAAGT CCACCTCGCT CGCCGCCATG CTGGGCTACC GCAATGCCAA TAGCTATGGT
CACATCGTCA CCATCGAGGA CCCCATCGAG TTCGTGCACT CCCACATCAA CTGCCTGGTG
ACCCAGCGTG AGGTGGGGGT GGACACCGAG AGCTACGAGG TGGCCCTGAA GAACACCCTG
CGCCAGGCCC CCGACGTGAT CCTGATTGGT GAGATCCGCG ACCGCGAGAC CATGGACTAC
GCCATCGCCT TCGCCGAGAC CGGTCACCTG TGTCTCTCCA CCCTGCACGC CAACAGCACC
AACCAGGCCC TGGATCGCAT CATCAACTTC TTCCCCGAGG AGCGGCGCCA GCAGCTGCTC
ATGGACCTGT CCCTGAACTT GAAGGGTGTC ATCTCCCAGC GGCTGATCCC CAAGGCCGAC
GGCAAGGGAA GGTCGCCCGC CGTGGAGATC ATGATCAACA GCCCGCTCAT GTCGGACCTG
ATCTTCAAGG GCGAGGTGCA CGAGATGAAG GAACTCATCT CCAAGTCCAA CGAGCTGGGC
ATGCAGACCT TCGACCAGGC CCTGTTCAAG CTCTTCGAGG AAGGCCATAT CACCTACGAG
GATGCCCTGC GCAACGCCGA CTCGGTCAAC GACCTGCGCC TGCGCATCAA GCTCGACAGC
AAGCGCGCCC GTCAGACGAA TCTCATGGAC GAGGTCGCGC ACCTGGAAGT GGAAGAGACG
CCGGAAGAAT CCGGTATGTT GAAATAA
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| Protein sequence | MDRDKAIRFM HDLLKTLLSK KGSDLFITVG APPSIKVDGR MTPITNQPLS PAHTQVLVRS
IMNDKQASEF ERTQECNFAI SLPGVSRFRV NAFTQRGTAG MVLRVITTEI PTFEQLGLPM
QLKDIAMTRR GLVIFVGGTG SGKSTSLAAM LGYRNANSYG HIVTIEDPIE FVHSHINCLV
TQREVGVDTE SYEVALKNTL RQAPDVILIG EIRDRETMDY AIAFAETGHL CLSTLHANST
NQALDRIINF FPEERRQQLL MDLSLNLKGV ISQRLIPKAD GKGRSPAVEI MINSPLMSDL
IFKGEVHEMK ELISKSNELG MQTFDQALFK LFEEGHITYE DALRNADSVN DLRLRIKLDS
KRARQTNLMD EVAHLEVEET PEESGMLK
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