Gene Tgr7_2913 details

Gene Information

• Locus tag: Tgr7_2913
• Symbol: pyrB
• ID: 7317018
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 3056353
• End bp: 3057363
• Gene Length: 1011 bp
• Protein Length: 336 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643617813
• Product: aspartate carbamoyltransferase catalytic subunit
• Protein accession: YP_002514973
• Protein GI: 220936074
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0540] Aspartate carbamoyltransferase, catalytic chain
• TIGRFAM ID: [TIGR00670] aspartate carbamoyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.460819
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGAGG CGCTGCTCAG CACGCGGGCC ATCCCGGCGG CCGGCCCCCT GCCCTCCAGC 
CTGCAGTTCA ACGAGGAGGG GCGCCTGCGT CACCTGCTCA CCATCGAGGG CCTGCCCCAC 
GCCCTGATCA CCGAGATCCT GGACACGGCG GAGTCCTTCG CCAGCATGAA TGCCCAGGCG 
GTGAAGAAGG TGCCGCTGCT GCGTGGCAAG ACCGTGGTGA ACCTGTTCTT CGAGGCCAGC 
ACCCGCACCC GCACCACCTT CGAACTGGCC GCCAAGCGCC TGTCCGCGGA CGTGCTAAAC 
ATGAATATCT CCACCTCCGC CACCACCAAG GGCGAGAGCC TGCTGGACAC CCTGCGCAAC 
CTGGAGGCCA TGTACGTGGA CATGTTCGTG GTGCGCCACG AATCCAGCGG CGCGGCGCAC 
TTCTTCGCCC GCCACGTGGC CCCCCACGTG TCGGTGCTCA ATGCCGGCGA CGGGCGCCAC 
GCCCATCCCA CCCAGGCGCT GCTGGACATG TTCACCATCC GCCGCCACAA GCAGGACTTC 
ACGCGCCTGC GGGTGGCCAT CGTGGGCGAC ATCCTGCATT CCCGGGTGGC CCGCTCCCAG 
ATCCACGCCC TGAACATCCT CAACACCGGC GAGATCCGCG TGATCGCGCC CCAGTCCCTG 
CTGCCGGCCC AGGTGGAATC CCTGGGCGTG CACGTCTACA ACGACATCCG CCAGGGTCTC 
AAGGACGTGG ACGTGATCAT CATGCTCAGG CTGCAGCGCG AGCGCATGGA GTCGGGCCTG 
CTGCCCTCGG AACACGAGTT CTTCCAGCTC TACGGCCTGA CCCAGGAACG CCTGGCCCTG 
GCCCATCCGG ACTGCATCGT CATGCACCCG GGCCCGGCCA ACCGCGGCGT GGAGATCGAC 
TCCCGGGTGG CGGACGGGCC CCGTTCCGTG ATCCTGGAGC AGGTGACCTA CGGCATCGCC 
GTGCGCATGG CGGTGATGTC CATGATCATG GGTGGGAGCG TGACCCCATG A 

 

Protein sequence

MSEALLSTRA IPAAGPLPSS LQFNEEGRLR HLLTIEGLPH ALITEILDTA ESFASMNAQA 
VKKVPLLRGK TVVNLFFEAS TRTRTTFELA AKRLSADVLN MNISTSATTK GESLLDTLRN 
LEAMYVDMFV VRHESSGAAH FFARHVAPHV SVLNAGDGRH AHPTQALLDM FTIRRHKQDF 
TRLRVAIVGD ILHSRVARSQ IHALNILNTG EIRVIAPQSL LPAQVESLGV HVYNDIRQGL 
KDVDVIIMLR LQRERMESGL LPSEHEFFQL YGLTQERLAL AHPDCIVMHP GPANRGVEID 
SRVADGPRSV ILEQVTYGIA VRMAVMSMIM GGSVTP