| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2900 |
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| Symbol | |
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| ID | 7317005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3040923 |
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| End bp | 3046847 |
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| Gene Length | 5925 bp |
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| Protein Length | 1974 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643617800 |
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| Product | putative CheA signal transduction histidine kinase |
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| Protein accession | YP_002514960 |
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| Protein GI | 220936061 |
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| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACG AGACCATCGA GTACAGCGCC CTGCACTGGG TGAAGAAGGA GCTGGACGCG
CTGCTCAACG AGGCGCGCGT CGCGCTGGAG TCCTACATCG AGGACGACGC CCAGACCGAC
AAGCTGGCGG ACACGGAGTC CAAGCTTCGA CAGGTCAACG GCACCCTGCA GATGGTGGAG
CTGCACGGCG CCGCCCTGCT CGCCGAGGAG ATGGTGCGCC TCACCCAGGC GGTGCGCGAC
GGCAGTGTCA CCAGCCGTGA CGACGCCTTC GAGGTGCTGA TGCGGGCCAT CCTGCAGCTG
CCCGATTACC TTGAACACAT CCAGACCGGG CATCGGGACA TCCCCATCGT CCTGCTGCCC
CTGCTCAACG ATCTTCGCAC CACCCGCAAC GCCAGCCTGA TGTCCGAGAA CGTGCTGTTC
TTCCCGGACA TGGAAGGCAT CATGGATCGC GACGAGGGCG AGACCGAGGT CAGACCCAGC
GGCGAGGACA TCCGTGAACT GGCACGCCGC AGCCGCCATC ACTACCAGCT CGGTCTGCTG
GGTCTGTTCC GCAACCGCGA CGTACCCCAG AGCCTGCAGC GCATCCAGTC GGTGATCGCC
GACCTGCGCC GGGCCGCCAG GGACGATGCC GTGCGGCGTC TGTTCTGGGT GGGCGGTGCC
GTCGCCGAGG CCCTCGGCAG CGGCGCCCTG GAGCCCAGCG TCACGGTCAA GCAGCTGCTG
GGGCGCATCG ACCGCGAGAT GCGTGTGCTG ATCCAGGACG GCGAGTCCGC CCTGGGCGCG
CGTATCCCCG GTGACCTGAT CAAGAACCTG CTCTACTACG TGGCCCGCTC CCGTCCCGGC
GGCGAGCAGG TGGGCGCGGT CAAGCGTGCC TTCCGCCTCA ACGAGCTGCT GCCCGAGGGC
GCGGACCTGG AAGAGGCCCT GGCCAACATC CGCGGCCCCA ATCAGGAGCT GATGGACACG
GTCTCCCGCG CCATCCGCGA GGACCTGGCC GAGGTCAAGG ACGGTCTGGA CGTGTTCATG
CACAGCGCCC AGGCCAGGGT GGAGGATCTC AAGCCCCAGG TGGAGAAGCT GCATCGCATG
GCCGATACCA TGGCCATGCT GGGTATGGCC GAGCCCCGGG AGATGGCCCT GCGCGAGGCC
GATACCATCG ATGCCCTGAT CGCGGCCGGT GATGAGGCCA AGGACGATAC GCTGCTCATG
GACGTGGCCT CCCGCCTGCT CAACATGGAA GCTGCGGTCA ACGGCCTGGT GGCCTCCCGT
GGGCGCGCCG GTGCCCGTGC CGGACTGCTG CCCGATGCCC TGGGCGAACT GTCCGCCGCC
GAGTCGCGCA CCATCATCAA TTCCATGCTG CGTGAGGCCC TGGCCGACAT GACCCGGGCC
AAGAGCGGCA TCCTCGATTT CGTGGCGGAA CCGGCCAAGG TCGAGCATCT GAGCGAAGTC
CCGGCGACCC TGCAGCGGGT GGGCGGCGCG CTCTCCATCC TCTCCCTGGA GGGCGTGGAG
GAGGTGCTGC GTGGCATCCG CGATTACGTG CAGGCCGGTG TCCTGGCCAC CGGCAAGGTG
CCCCCGGCAG AGCAGCAGGA GGCCCTGGCC GAGGCCATCA CGGCGGTGGA GCTCTATCTG
GAGACCCTGG ACTCTGGCAA CGGGGATCCA CGCCCGATGC TGGAGACCGC GCGGACCTGC
GTGGCCCGAC TCAGCACGCC CGAACTGCCT GCGGCCCTCT CCGCCGACGA GACCCTGATC
GTCACCCCGG AGCATGGTCT GTCGATGCCT GCAGCCGACG AAGACGCGAC CTGGATGACA
TCGCGTCCCG CACCGGCAGC AGACATGCCC GAGCCCGAGG CAACCGTGGC GGAAGTCCCG
GAGTCGGTTG AGGTGGCGCA ACCGTCCGAG GAGATCGCGG CCGCGCCGGC AGCGGAGCCC
GAACCCGAGC CGCAGCGCTT CCCGGTGCTT TCCGGTGAGG TGGACGAGGA GATCAAGGAG
ATCTTCCTGG AAGAGACCAC GGAAGAGATC GAGCGCATCA GCGAATACCT GCCGCGCTGG
CGGGAGAACC CGGCAGACCA GGAGGCGCTC ACCACGGTGC GCCGTTCCTA CCACACCCTC
AAGGGCAGCG GCCGTCTGGT CGGCGCGTTG CTGCTGGGTG AATTTGCCTG GTCCATGGAA
AACCTGCTCA ACCGCATCAT CGACCAGAGC GTCTCTCCCG GCCCGGCCGT CTACGCCGTG
CTGGGCGAAG CCCTGCGGAT GCTGCCCGTG TTGCGCGGGC AGATCGAGGG AGGCGAGGGT
GATGAGCCCG GCACCTATGC GCTGATGGCC CGGGCTCACG CCCTGGCCCG CGGTGAGACC
GCGCCTGCCA GGGCCGCCCC GCCGGCGCTA GCCCCTGTCG AGCCCCCGGT GAGCGCCGCA
CTCGCTGAGG CACCCGAGGC TTCCGAGCCG GAGATCTCCG GCGAGGTCGT GCCCACCGTG
ATCCTGGACC GGGAGGATCT GGATTTTTCC AGCCCGGATG TCCAGGCCCC CGTGACCGCC
GAGACCGGTC CGCAGGCCGA TGACACCCTG ACAGGCCTCG CAGTCGAGGG TGGCTTCGAT
CTGGCGCTGG AGCCGGGCAC GGATGAGGAT ACCCTGGCCC AGGGAGAGAC CGGCCTGTCC
CTGGAGGACC TGGACGTTGG CGCTGCCGCC GAGGAACTGA ACGCACTCGA ACCACTTGAA
GGCGAATTTG GCAGCCTCGA GACACCGCCC GAAGAGTCGA CCCTGACGTT TGAAACCGAG
GCGCTCGAGG CGCCTGAGGC GGGTACCCCG CGGCCGGAGG CCGATACGGT GATCTCCGCA
CCGGCCGGAC TGTCCGACCA TCACGAGGCG GAAACCCGCT TCATGGCCAG GGCAGAGATT
CCGGGCATGG AGCCGACGCC GGCCGAGGCA GTGCCACCGG TGGCCCAGCG TATGGACCCG
GCCCTGTTCG AGATCTTCCG TAACGAGGCC ACCCAGCATC TCAACACCCT GCGTAGCCAG
CTGGAGGGCG CGTCCCGGGA AGACGGCGGC ATGCCGGTCA CTGATGCACT GCTGCGCGCG
GTACACACCC TCAACGGCGC GGCTCGCACG GCGGAGGTCC CCGAGATCTT CGAGGTCTGT
GCGCCCTGCG AGCGCTACGT CAAGGCGCGC GCGGACACCG AGGCCTTCGT GCCCGGTGCA
GCCCTGCCCG GGTTCTGGTC GCTCATCGAG CACGTCAGCG GCGTGATCGA GGCCCTGGGC
CGGGGCGAGG ATCCCCTGCC TTCCGGCGAA CGTCTGGCTG AAGACATGCA GGCGATGCTG
GATGAGGAAC TGGCACGTCA GGAAAGGGTT CGCCAGGAGG AGGCCCGCCA GTCGGCGGCC
GCCCTGGCCG CGGCCGCTGC AGCTGCCGTT CCGGCGCAGC CCGCACCGAC CGAGGCCGTC
ACCTACGACG AGCAGGACCA GGAGCTGGTG GACATCTTCC TGGAAGAGGG TGGCGAGATC
CTGGATGCCA GCGACAACCT GCTGGAGTCC TGGCGTCACA ACCTGAACGA TCAGGGCATC
ATTGCCGAGA TCCAGCGCCA GCTGCATACC CTCAAGGGCG GCGCCCGCAT GGCGGGTCTG
CGGCCTATCG GCGATCTGAG TCATGCCCTG GAGACCCTGG TGATCGACAT CACCGAGGGC
CGTGGCCAGG CGCAGCCCGC GATGCTGGAC GTGGTGGCCC AGTCCCTGGA CACCCTGAGC
CGACAGCTGG AACAGGCCCG CCGGCGTGAG TCGCTGATCA CCGCCCCGGA TCTGATCGCG
CGGCTTTCCG GTTTCAAGGC CGGCGAGGCC GAGGCCCCCG CCGAGCGGGC CGCGCCGTCA
GTACCCGAGA CCGTCTCCAT CACCGAGGAG ATCCCGGCCC AGTCCCCGGT CGAGGACGAG
ATCGTCATCG AGGAGATCCC GGTCGACGAG GCATCCCCGC GCCTGAGCGT GGACGAACTC
CCGGACGAGA CCCTGGAACT GGTGGAAGAG CCGGGCTACG GCGGCGGTGA GCCCACCCTG
ACCGAGATCC CCGAAGTGTC TGCGGCGGCG CCGGCGGAAG AGCCGGCCCG GGCCGGTGCC
CGTGCGGCCG CCGACAGCGG TCCCCAGGAG CTGGTGCGTG TGCGCTCCGA GGTGCTGGAC
AACCTGGTGA ACTACGCGGG CGAGGTGAAC ATCTACCACG CCCGTCTGGA ACAGCAGATC
ACCGGGTTCC GTTTCAATCT GGGCGAGCTG TCCCAGACCG TGACCCGTCT GCGTGAACAG
CTGCGCAAGC TGGAGATGGA GACCGAGGCG CAGATCCTGT TCCGCTATGA GCAGGAGAAA
CAGGACCACG AGATCGACGC GGATTTCGAT CCGCTGGAGA TGGACCGCTA CTCCAACATC
CAGCAGCTGT CCCGGGCCCT GGCCGAATCC ATCAACGACC TGGTGAGTAT CCAGGACATC
CTCTCCGACC AGGTGCGCGA CTCCGAGACC CTGCTGCTGC AGCAGTCCCG CGTGAGTACC
GACCTGCAGG AAGGCCTCAT GCGCACGCGC ATGGTGCAGT TCTCCAACAT GGTGCCGCGT
CTGCGCCGTG TGGTGCGCCA GACGGCCACG GAACTGGGCA AGCGGGTGGA GCTGGACATC
CAGGGTGAAG GCAGCGAACT GGACCGCTCC GTGCTCGAGC GCATGGTCTC GCCCCTGGAG
CACATGCTGC GCAACGCCGT GTATCACGGC ATCGAGTCAG CGGACAAGCG CCGCGCCACG
GGCAAGGCCG ATGCGGGGCA TATTGACATC CAGGTCACCC GTGAGGGCTC CGAGGTGGTG
ATCCGGGTCA GCGACGACGG CGGCGGCATC AACCTGGATG CCGTGCGCAG CAAGGCCATG
CGCCTGGGCC TGATCAAGGG CGACGAGGCG CTCACCGACG AGGACATCAT GCAGTTCATC
CTCGAGTCCG GTTTCTCCAC CGCCCAGGAG GTCAGCCAGA TCTCGGGACG CGGCGTGGGC
ATGGACGTGG TGAACAGCGA GATCAAGCAG CTGGGCGGCA CCCTGGGCAT CGAGACCGTG
CCCGGCAAGG GCACCCGCTT CACGGTGCGC CTGCCCTTCA CCCTGGCCAT CAACCAGGCC
CTGCTGGTGC AGGTGGGCGA GGATATCTAC GCCGTGCCCC TGTCCAGCAT CGAAGGCATC
GTGCGCGCGC GTGCCGGCGA CCTGGCCCGC TACTACGAGG AGGCCAATCC CACCTACGAC
TATGCCGGCA ACACCTACGA GGTGAAACAC CTGGGTGCCC TGCTGGAAGT CTCCCAGCCC
AACCTGCATG CCTCGGACGT GATGTACCCC GTGCTGCTGG TGCGTTCCGG TGATCACCGT
ATCGCCCTGC ACGTGGACGG CCTGCTGGGC AGCCGCGAGG TGGTGATCAA GTCGGTGGGG
CCGCAGGTGG CCAAGGTGCG CGGCATCTCC GGTGCCACCA TCCTGGGCGA CGGTCGCGTG
GTGCTGATCC TGGACGTGCC GGCCCTGGTG CGCATCGGTG CCGGTGTGCA GCTGGTCTAC
CGGGCGCCGG AAGGCGAGGC CGCAGAGGCG GAGGAGCACA TTCCCACGGT CATGGTGGTG
GACGACTCCA TCACCATCCG CAAGGTCACG GCGCGCATGC TGGAGCGCAA CCACTATCGG
GTCATCACGG CGAAGGACGG TCTCGACGCC GTGGCCCAGC TTCAGGAGCA TGTGCCCGAC
GTGATGCTGC TGGATATCGA GATGCCGCGC ATGGACGGCT ATGAGCTGGC CACCCATATC
CGCAATGACA GCCGGCTCAG GGAGATCCCG ATCATCATGA TCACCTCCCG TACCGGTGAA
AAGCACCGCC AGCGTGCCCT GGACATCGGC GTGAACCGCT ACCTGGGCAA GCCCTACCAG
GAGGCGGATC TGCTCGCCAA CATCCAGGAC ATCCTGGCGC AGTGA
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| Protein sequence | MTDETIEYSA LHWVKKELDA LLNEARVALE SYIEDDAQTD KLADTESKLR QVNGTLQMVE
LHGAALLAEE MVRLTQAVRD GSVTSRDDAF EVLMRAILQL PDYLEHIQTG HRDIPIVLLP
LLNDLRTTRN ASLMSENVLF FPDMEGIMDR DEGETEVRPS GEDIRELARR SRHHYQLGLL
GLFRNRDVPQ SLQRIQSVIA DLRRAARDDA VRRLFWVGGA VAEALGSGAL EPSVTVKQLL
GRIDREMRVL IQDGESALGA RIPGDLIKNL LYYVARSRPG GEQVGAVKRA FRLNELLPEG
ADLEEALANI RGPNQELMDT VSRAIREDLA EVKDGLDVFM HSAQARVEDL KPQVEKLHRM
ADTMAMLGMA EPREMALREA DTIDALIAAG DEAKDDTLLM DVASRLLNME AAVNGLVASR
GRAGARAGLL PDALGELSAA ESRTIINSML REALADMTRA KSGILDFVAE PAKVEHLSEV
PATLQRVGGA LSILSLEGVE EVLRGIRDYV QAGVLATGKV PPAEQQEALA EAITAVELYL
ETLDSGNGDP RPMLETARTC VARLSTPELP AALSADETLI VTPEHGLSMP AADEDATWMT
SRPAPAADMP EPEATVAEVP ESVEVAQPSE EIAAAPAAEP EPEPQRFPVL SGEVDEEIKE
IFLEETTEEI ERISEYLPRW RENPADQEAL TTVRRSYHTL KGSGRLVGAL LLGEFAWSME
NLLNRIIDQS VSPGPAVYAV LGEALRMLPV LRGQIEGGEG DEPGTYALMA RAHALARGET
APARAAPPAL APVEPPVSAA LAEAPEASEP EISGEVVPTV ILDREDLDFS SPDVQAPVTA
ETGPQADDTL TGLAVEGGFD LALEPGTDED TLAQGETGLS LEDLDVGAAA EELNALEPLE
GEFGSLETPP EESTLTFETE ALEAPEAGTP RPEADTVISA PAGLSDHHEA ETRFMARAEI
PGMEPTPAEA VPPVAQRMDP ALFEIFRNEA TQHLNTLRSQ LEGASREDGG MPVTDALLRA
VHTLNGAART AEVPEIFEVC APCERYVKAR ADTEAFVPGA ALPGFWSLIE HVSGVIEALG
RGEDPLPSGE RLAEDMQAML DEELARQERV RQEEARQSAA ALAAAAAAAV PAQPAPTEAV
TYDEQDQELV DIFLEEGGEI LDASDNLLES WRHNLNDQGI IAEIQRQLHT LKGGARMAGL
RPIGDLSHAL ETLVIDITEG RGQAQPAMLD VVAQSLDTLS RQLEQARRRE SLITAPDLIA
RLSGFKAGEA EAPAERAAPS VPETVSITEE IPAQSPVEDE IVIEEIPVDE ASPRLSVDEL
PDETLELVEE PGYGGGEPTL TEIPEVSAAA PAEEPARAGA RAAADSGPQE LVRVRSEVLD
NLVNYAGEVN IYHARLEQQI TGFRFNLGEL SQTVTRLREQ LRKLEMETEA QILFRYEQEK
QDHEIDADFD PLEMDRYSNI QQLSRALAES INDLVSIQDI LSDQVRDSET LLLQQSRVST
DLQEGLMRTR MVQFSNMVPR LRRVVRQTAT ELGKRVELDI QGEGSELDRS VLERMVSPLE
HMLRNAVYHG IESADKRRAT GKADAGHIDI QVTREGSEVV IRVSDDGGGI NLDAVRSKAM
RLGLIKGDEA LTDEDIMQFI LESGFSTAQE VSQISGRGVG MDVVNSEIKQ LGGTLGIETV
PGKGTRFTVR LPFTLAINQA LLVQVGEDIY AVPLSSIEGI VRARAGDLAR YYEEANPTYD
YAGNTYEVKH LGALLEVSQP NLHASDVMYP VLLVRSGDHR IALHVDGLLG SREVVIKSVG
PQVAKVRGIS GATILGDGRV VLILDVPALV RIGAGVQLVY RAPEGEAAEA EEHIPTVMVV
DDSITIRKVT ARMLERNHYR VITAKDGLDA VAQLQEHVPD VMLLDIEMPR MDGYELATHI
RNDSRLREIP IIMITSRTGE KHRQRALDIG VNRYLGKPYQ EADLLANIQD ILAQ
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