Gene Tgr7_2898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2898 
Symbol 
ID7317003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp3039606 
End bp3040340 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content68% 
IMG OID643617798 
Productprotein of unknown function DUF558 
Protein accessionYP_002514958 
Protein GI220936059 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACCA CCCGTCTGTA CCTGAACCAG TCCCTGTCCG TCGGGGACAC CATCGAACTG 
GACGAACGCG CTCACCGACA TGTGGTACAG GTGTTGCGCC TGCGCCCCGG CGCGGAACTC
GTGCTGTTCA ACGGTCAGGG TGGGGAATAC CGCGCCACAC TGACCGAGGC CCAAAAGCGT
CACTCCAGTG TTTCCCTCAC CGGCTTCGAT CCCCGTGACA CCCGCCCAGC ACTCCCGGTC
ACCCTGGTGC AGGGCATCTC CAAGGGGGAC CGCATGGACT ACAGCCTGCA GAAGGCCACG
GAACTGGGGG TGAGCAGGAT CCAGCCGGTG CTCACCCAGC GCAGCCAGGC ACCGGGCGAC
CCCAGGCGCC TGGACAACCG GCTGGAACAC TGGCGCGGCG TGGTGATCAG CGCCTGCGAA
CAATGCGGAC GCAACGAGCT GCCCGAGCTG GGCGGGGTGA TATCATTTCA GGCGTGGCTG
GGCAGCGAAC CGGACAGCGG CCTAGGCCTG GTCCTGGACC CGCGCGCGGA GACCGGATTG
TCCGGGCTCG TCCCGCCTGA AGGTGAGGTC AGCCTGCTGA TCGGACCCGA GGGAGGCCTG
GACGAGGCCG AGATCCTGGC CGCCCGGCAC CGGGGCTTCA CTCCGGTGCG CCTGGGCCCG
AGGATCCTGC GCACGGAGAC CGCCGGCGTG GCGGCACTGG CGGTGATTCA GGGCTTGTGG
GGGGACCTTC GTTGA
 
Protein sequence
MRTTRLYLNQ SLSVGDTIEL DERAHRHVVQ VLRLRPGAEL VLFNGQGGEY RATLTEAQKR 
HSSVSLTGFD PRDTRPALPV TLVQGISKGD RMDYSLQKAT ELGVSRIQPV LTQRSQAPGD
PRRLDNRLEH WRGVVISACE QCGRNELPEL GGVISFQAWL GSEPDSGLGL VLDPRAETGL
SGLVPPEGEV SLLIGPEGGL DEAEILAARH RGFTPVRLGP RILRTETAGV AALAVIQGLW
GDLR