Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2898 |
Symbol | |
ID | 7317003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 3039606 |
End bp | 3040340 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643617798 |
Product | protein of unknown function DUF558 |
Protein accession | YP_002514958 |
Protein GI | 220936059 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCACCA CCCGTCTGTA CCTGAACCAG TCCCTGTCCG TCGGGGACAC CATCGAACTG GACGAACGCG CTCACCGACA TGTGGTACAG GTGTTGCGCC TGCGCCCCGG CGCGGAACTC GTGCTGTTCA ACGGTCAGGG TGGGGAATAC CGCGCCACAC TGACCGAGGC CCAAAAGCGT CACTCCAGTG TTTCCCTCAC CGGCTTCGAT CCCCGTGACA CCCGCCCAGC ACTCCCGGTC ACCCTGGTGC AGGGCATCTC CAAGGGGGAC CGCATGGACT ACAGCCTGCA GAAGGCCACG GAACTGGGGG TGAGCAGGAT CCAGCCGGTG CTCACCCAGC GCAGCCAGGC ACCGGGCGAC CCCAGGCGCC TGGACAACCG GCTGGAACAC TGGCGCGGCG TGGTGATCAG CGCCTGCGAA CAATGCGGAC GCAACGAGCT GCCCGAGCTG GGCGGGGTGA TATCATTTCA GGCGTGGCTG GGCAGCGAAC CGGACAGCGG CCTAGGCCTG GTCCTGGACC CGCGCGCGGA GACCGGATTG TCCGGGCTCG TCCCGCCTGA AGGTGAGGTC AGCCTGCTGA TCGGACCCGA GGGAGGCCTG GACGAGGCCG AGATCCTGGC CGCCCGGCAC CGGGGCTTCA CTCCGGTGCG CCTGGGCCCG AGGATCCTGC GCACGGAGAC CGCCGGCGTG GCGGCACTGG CGGTGATTCA GGGCTTGTGG GGGGACCTTC GTTGA
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Protein sequence | MRTTRLYLNQ SLSVGDTIEL DERAHRHVVQ VLRLRPGAEL VLFNGQGGEY RATLTEAQKR HSSVSLTGFD PRDTRPALPV TLVQGISKGD RMDYSLQKAT ELGVSRIQPV LTQRSQAPGD PRRLDNRLEH WRGVVISACE QCGRNELPEL GGVISFQAWL GSEPDSGLGL VLDPRAETGL SGLVPPEGEV SLLIGPEGGL DEAEILAARH RGFTPVRLGP RILRTETAGV AALAVIQGLW GDLR
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