| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2893 |
|---|
| Symbol | |
|---|
| ID | 7316998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 3032018 |
|---|
| End bp | 3034015 |
|---|
| Gene Length | 1998 bp |
|---|
| Protein Length | 665 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643617793 |
|---|
| Product | transketolase |
|---|
| Protein accession | YP_002514953 |
|---|
| Protein GI | 220936054 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0021] Transketolase |
|---|
| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCCC GTAGAGAGCT AGCCAACGCC ATCCGTGCGC TCAGCATGGA TGCGGTCCAG
AAGGCCAACT CCGGTCACCC CGGCGCCCCC ATGGGCATGG CTGATATCGC CGAGGTGCTG
TGGAACGACT ACATGAAGCA CAACCCGGCC AACCCCAAGT GGGCCGACCG CGACCGCTTC
GTGATGTCCA ATGGCCACGG CTCCATGCTG GTCTACTCCC TGCTGCACCT CACCGGCTAC
GACCTGCCCA TGGACGAGCT GAAGAACTTC CGTCAGCTGC ACTCCAAGAC CCCCGGTCAC
CCTGAATACG GTTACACCCC CGGCGTTGAG ACCACCACCG GCCCCCTGGG CCAGGGCATC
ACCAATGCCG TGGGCATGGC CATCGCCGAG AAGGCCCTGG CCGCCCACTT CAACCGCGAC
GGCCACACCG TGGTGGACCA CAACACCTAC GTGTTCCTGG GTGATGGCTG CCTCATGGAA
GGCATCTCCC ACGAGGCCTG CTCCCTGGCC GGCACCCTGG GCCTGGGCAA GCTGATCGCC
TTCTACGACG ACAACGGCAT CTCCATCGAC GGTGAAGTGG AAGGCTGGTT CACCGACGAC
ACCCCCAAGC GCTTCGAGTC CTACGGCTGG CACGTGGTGC CCGGCGTGGA CGGCCACGAC
GGCGAGGCGG TGAAGAAGGC CATCGAGGCT GCCCGCAAGG TCACCGACAA GCCCTCCATC
ATCTGCTGCA AGACCGTGAT CGGTTTCGGC TCCCCCAACA AGCAGGGCAA GGAAGAGTGC
CACGGCGCGC CCCTGGGCAA CGACGAGATC AAGCTGGCCC GCGAGACCCT GGGCTGGAAG
CACGAGCCCT TCGTCATCCC CGACGAGATC TACGCCGGCT GGAACGCCCG CGACAAGGGT
GCCCAGGCCG AAGCCGCCTG GAACAAGACC TTCGCCGAGT ATGAAAAGGC CCACCCGCAG
TTGGCCGCCG AGTTCAAGCG CCGCATGAGC GGTGAGCTGC CTGCCGACTG GCAGGAGAAG
GCCGGCGCCT ACATCAAGGC CACCATCGAC AAGGCCGAGA CCATCGCCTC CCGCAAGGCC
TCCCAGAACG CCATCGGCGG CTATGCCCCG GCCCTGCCGG AACTGCTGGG CGGCTCCGCC
GACCTGGCCG GTTCCAACCT GACCCTGTGG AAGGGTTCCA AGGGCGTTAG CAAGGAAGAC
GGCGACGGTA ACTACGTGTT CTACGGCGTG CGCGAGTTCG GCATGGCCGC GATCATGAAC
GGCATTGCCC TGCACGGCGG CTTCATCCCC TACGGCGGCA CCTTCCTGAT CTTCTCCGAC
TACGCCCGCA ACGGCATGCG CATGTCCGCG CTCACCAAGC AGCGGGTGAT CTACGTGCTG
ACCCACGACT CCATCGGTCT GGGCGAGGAC GGCCCCACCC ACCAGCCGAT CGAGCAGGTG
AGCAGCCTGC GCATCATCCC CAACATGTCC CTGTGGCGCC CCTGTGACGC GGTGGAGACG
GCCGTGGCCT GGAAGGCGGG CATTGAGCGG ACCTCCGGTC CCACCTCCCT GATCCTGTCC
CGTCAGAACC TGCCCCACCA GGCCCGCAGC GCCGAGCAGG TGGCCAGCAT CGCCAAGGGC
GGTTACATCC TCAAGGACAC CGACGGCACC CCTGACGCCA TCATCATCGC CACCGGTTCC
GAGGTGGGTA TCGCCATGGA AGCGGCCGAG AGCCTGGCCG GCAAGGGCAG GAAGGTGCGC
GTGGTCTCCA TGCCCTGCGC CGACCTGTTC GACGCCCAGG ACGCCGCCTA CCGCGAGGCC
GTGCTGCCCA AGGCCGTGCG CGCCCGGGTG GCCGTAGAGG CCGGTGTCAC CGGTTTCTGG
CTCAAGTACG TGGGCCTCGA CGGCCGCGTG GTGGGCATCG ACCGCTTCGG TGAATCCGCC
CCCGGCGGCG CCCTGATGAA GGAGTTCGGC TTCACCGCCG AGAACGTCGC CAGGGCCGTG
GAAGAGGTCC TCGCCTGA
|
|---|
| Protein sequence | MPSRRELANA IRALSMDAVQ KANSGHPGAP MGMADIAEVL WNDYMKHNPA NPKWADRDRF
VMSNGHGSML VYSLLHLTGY DLPMDELKNF RQLHSKTPGH PEYGYTPGVE TTTGPLGQGI
TNAVGMAIAE KALAAHFNRD GHTVVDHNTY VFLGDGCLME GISHEACSLA GTLGLGKLIA
FYDDNGISID GEVEGWFTDD TPKRFESYGW HVVPGVDGHD GEAVKKAIEA ARKVTDKPSI
ICCKTVIGFG SPNKQGKEEC HGAPLGNDEI KLARETLGWK HEPFVIPDEI YAGWNARDKG
AQAEAAWNKT FAEYEKAHPQ LAAEFKRRMS GELPADWQEK AGAYIKATID KAETIASRKA
SQNAIGGYAP ALPELLGGSA DLAGSNLTLW KGSKGVSKED GDGNYVFYGV REFGMAAIMN
GIALHGGFIP YGGTFLIFSD YARNGMRMSA LTKQRVIYVL THDSIGLGED GPTHQPIEQV
SSLRIIPNMS LWRPCDAVET AVAWKAGIER TSGPTSLILS RQNLPHQARS AEQVASIAKG
GYILKDTDGT PDAIIIATGS EVGIAMEAAE SLAGKGRKVR VVSMPCADLF DAQDAAYREA
VLPKAVRARV AVEAGVTGFW LKYVGLDGRV VGIDRFGESA PGGALMKEFG FTAENVARAV
EEVLA
|
|---|
| |