Gene Tgr7_2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2880 
Symbol 
ID7315317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp3019244 
End bp3019705 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content64% 
IMG OID643617780 
Producthypothetical protein 
Protein accessionYP_002514940 
Protein GI220936041 
COG category[S] Function unknown 
COG ID[COG5615] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCG CCATTACCCT GCACGTCCTC TCCGCCGTCA TCTGGGTGGG CGGCATGTTC 
TTCGCCTACA TGGCCCTGCG CCCCGTGGCC GCGAGTCTGC TCGAGCCCCC CATGCGCACC
ACCCTCTGGC GGGACACCTT CAACCGTTTC TTCCCCTGGG TGTGGGCGGC GGTGATCCTG
CTGCTGGTGA CCGGCTACTG GATGCTGTTC AAGAAGTTCG GCGGCATGGC CCATGCGCCC
CTGTACGTGC ACGTCATGAA CGGCCTGGGT CTGGTGATGA TGGCCATCTA CCTGCACGTG
TTCTTCGCCC CCTTCCGCCG CATGAAGCAG GCCATCAGCG CCCAGGACTG GCCCGAGGCC
GGCCGCCGGC TGGGACAGAT CCGCATGCTG ATCGGGATCA ATCTGATCAT CGGACTGGTG
GTGGTGGCGG TGGCTTCGGG TGGGGCTTAT TTGATCGTTT GA
 
Protein sequence
MSIAITLHVL SAVIWVGGMF FAYMALRPVA ASLLEPPMRT TLWRDTFNRF FPWVWAAVIL 
LLVTGYWMLF KKFGGMAHAP LYVHVMNGLG LVMMAIYLHV FFAPFRRMKQ AISAQDWPEA
GRRLGQIRML IGINLIIGLV VVAVASGGAY LIV