| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2839 |
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| Symbol | |
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| ID | 7315276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2978635 |
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| End bp | 2980905 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643617739 |
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| Product | DEAD-like helicase |
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| Protein accession | YP_002514899 |
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| Protein GI | 220936000 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCTCG ATCTTGAAAC TGTTCCCGAT ACCGCCGTGC AGGGCGACCT GCTGGAAGCG
GCGGCTTCTC CACTCACGAT CAGCTTGCAG GACTTCGTAT CGGAGTTCGG CGATGAGCTG
CTCGACTCTC TCAACCGCGC CAACCCGCCT GTCTACGCCG GACAGGCACG GGCGCATCGC
CAGACCATCC TGGCCGGCCT GAAGCGGAAG TTGTTTCCCG CCCAGGCCGA AGTCGTCCAT
GCCGTCACCG AGCTGCTGGT CGATCGTGGC GAACGTGCCG CGATCGTCAA CGGCGAGATG
GGCTGCGGCA AGACGACCGT CGGCATCGCC ACGGCCGCCG TGCTCAATGC CGAAGGCTAC
CGCCGCACCC TGGTGCTCTC GCCACCCCAC CTAGTCTACA AGTGGCGGCG CGAAATTCAG
GAGACGGTGG CCGGCGCCAA GGTCTGGGTG CTCAACGGCC CGGACACGCT GGTCAAGCTG
CTGAAACTGC GCGAGCAGTT GGGCGTACCA CCCCAGGGGC AGGAGTTCTT CGTCCTCGGC
CGTGTGCGCA TGCGCATGGG CTTTCACTGG AAGCCGGTGT TCGTGCGTTG GCGTACCCGT
CACGGCGACG TGGGGGCGTG CCCGCATTGC GGCCATGTCA TCACCGACCT GGACGGCGAG
CCGATCAACC CGGTGGAACT CGAAGCGGAG GAAACCCGCC GCAAGTGCGG ACACTGCGCC
TCGGCGCTGT GGACGCTGAT CCGTCCCCGG CGCCTGTCGG TCAACGACCA GTCGCAAGCC
GTGCTCAAGG CGCTCAAGCG TATTCCCACC ATCGGCGAAG TCACGGCACA GAAGCTGATG
AAGAAGTTCG GCGAGTCGTT CCTGGCTTCG ATGCTGGGCG ACAACCTGTA CGAGTTCATC
AATCTCATGG ACGACAACGG CGAGCTGGTG TTTTCCGACC GGCAGGCCCA GCGCATGGAA
CGTGCGATGG CCTCGATGGA GTTCGGCTTC GGCGAAGGTG GCTATCAGCC TTCGGAATAC
GTCAAACGCT ACCTGCCGCA AGGCACGTTC GACCTGCTCA TCGCCGACGA GGCGCACGAG
TACAAGAACG CGGGTTCCGC CCAAGGGCAG GCGATGGGGG TCTTGGCCTC CAAGTCACGC
AAGACGCTGC TGCTGACCGG CACCTTGATG GGCGGCTACG GCGACGACCT GTTCTACCTG
CTGTTCCGCG CCCTGCCTGG GCGAATGATC GAAGACGGCT ACCGGCCGAG CAAGCAAGGC
AGTCTGACGC CGGCCGCGAT GGCGTTCATG CGCGATCACG GCGTGCTCAA AGACATCTAC
TCCGAGAGCA ACGGCTCGGC CCACAAGACC GCCAAGGGCA GCAAGATCAC GGTGCGAACC
GTGAAGGCCC CCGGCTTCGG TCCCAAGGGC GTGCTGCGCT GCGTATTGCC GTTCACGGTC
TTCCTCAAGT TGAAGGACAT CGGTGGCAAC GTGCTGCCGC CCTACGACGA GGAGTTCCGC
GAAGTGGCGA TGGACGCGGA GCAGGCGCAG GCCTATGGAC GCCTGGCGGG GCAACTGACC
GCCGAGCTGA AGCAGGCGCT GGCGCGCCGC GACACGACGC TGCTGGGTGT GGTCCTCAAC
GTGCTGCTGG CCTGGCCGGA CACGTGCTTT CGGTCCGAGA CGGTCAAGCA TCCGCGCACC
CGCAACCTGC TGGCGTTCAC GCCGTCGCTG TTCACCGATC TGGAGGTCAT GCCGAAGGAG
CGGGAGCTGA TCGATATCTG CCGCGAGGAA AAAGCGGCGG GACGCAAGGT GCTGGTCTAC
AGCGTCTATA CCGGCACGCG CGACACCACA TCGCGCTTGA AGGTGCTGCT GGAGCAGGAA
GGCTTCAAGG TGGCGGTACT GCGCGCGAGC GTGGATGCCT CCCGCCGGGA AGACTGGATC
GCCGAGCAGT TGGATCGCGG CATCGACGTG CTCATCACCA ACCCCGAACT GGTGAAAACC
GGCCTGGACC TGTTGGAGTT TCCGACCATC GTGTTCATGC AGTCGGGCTA CAACGTGTAC
TCGCTGCAGC AGGCCGCGCG CCGTTCCTGG CGTATCGGGC AGAAGCAGCC GGTCCGGGTG
ATCTACCTCG GCTACGCGGC CACCTCGCAG ATGACTTGCC TGGGGCTGAT GGCCAAGAAG
ATCACGGTGT CGCAGAGCAC GTCGGGAGAC GTGCCGGAAT CAGGGTTGGA CGTTCTCAAT
CAGGACGGCG ACTCGGTGGA AGTGGCACTG GCACGGCAGT TGGTACATTG A
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| Protein sequence | MSLDLETVPD TAVQGDLLEA AASPLTISLQ DFVSEFGDEL LDSLNRANPP VYAGQARAHR
QTILAGLKRK LFPAQAEVVH AVTELLVDRG ERAAIVNGEM GCGKTTVGIA TAAVLNAEGY
RRTLVLSPPH LVYKWRREIQ ETVAGAKVWV LNGPDTLVKL LKLREQLGVP PQGQEFFVLG
RVRMRMGFHW KPVFVRWRTR HGDVGACPHC GHVITDLDGE PINPVELEAE ETRRKCGHCA
SALWTLIRPR RLSVNDQSQA VLKALKRIPT IGEVTAQKLM KKFGESFLAS MLGDNLYEFI
NLMDDNGELV FSDRQAQRME RAMASMEFGF GEGGYQPSEY VKRYLPQGTF DLLIADEAHE
YKNAGSAQGQ AMGVLASKSR KTLLLTGTLM GGYGDDLFYL LFRALPGRMI EDGYRPSKQG
SLTPAAMAFM RDHGVLKDIY SESNGSAHKT AKGSKITVRT VKAPGFGPKG VLRCVLPFTV
FLKLKDIGGN VLPPYDEEFR EVAMDAEQAQ AYGRLAGQLT AELKQALARR DTTLLGVVLN
VLLAWPDTCF RSETVKHPRT RNLLAFTPSL FTDLEVMPKE RELIDICREE KAAGRKVLVY
SVYTGTRDTT SRLKVLLEQE GFKVAVLRAS VDASRREDWI AEQLDRGIDV LITNPELVKT
GLDLLEFPTI VFMQSGYNVY SLQQAARRSW RIGQKQPVRV IYLGYAATSQ MTCLGLMAKK
ITVSQSTSGD VPESGLDVLN QDGDSVEVAL ARQLVH
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