| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2823 |
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| Symbol | |
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| ID | 7315260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2965656 |
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| End bp | 2967671 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643617723 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_002514883 |
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| Protein GI | 220935984 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.172324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTGT TTCTGTGCGA AAAGCCTTCG CAAGGCAAGG ACATCGCCAG GGTGTTGGGC
GCCCGGCAGC GCGGCAACGG CTGCTACAGC GGTTCGGGTA TCACGGTGAC ATGGTGCATC
GGCCATCTTG TCGAGGCGGC ACCGCCGGAA ACCTACGGCG AGCAGTACAA GCAGTGGTCC
ATCGAGCAGT TGCCTATTCT TCCAGAGCGC TGGCGCATCG AGGTCAAGGC CAAGACCGCC
GCGCAGTTCA AGATCGTGAA GCAGTTCGTC GCCCAGGCCG GCGAGCTGGT GATCGCCACC
GACGCCGACC GCGAAGGCGA AATGATCGCG CGCGAGATCA TCGATCTGTG CGGCTACCGT
GGCCCGATCC AGAGGCTGTG GCTGTCGGCG CTCAACGATG CGTCGATCCG CAAGGCGCTG
ACTCAACTCA AGCCGGGTGG CGAAACGCTG CCACTGTATT TTTCCGCACT GGCCCGTTCG
CGCGCGGATT GGCTGATCGG CATGAACCTG AGCCGCCTGT TCACGGTGCT GGGTCGGCGG
TCTGGGTATC AGGGCGTGCT GTCGGTCGGT CGCGTACAGA CACCGACACT GAAACTGGTG
GTGGACCGCG ACCGCGAGAT CGCACGCTTC GTCTCCGTAC CGTATTGGAC CATCGACGTC
ACGCTGTCCC ACGCGGGCCA GTCCTTCGCG GCAAGCTGGA TGCCGCCCGA CGGCACCACG
GATGCAGCCG GTCGCTGCCT GCAGCAGCCA GTGGCGCAGC AGGCTGCCGA CCGCATCCGT
GCGGGTCGTG AATCGAAGGT GCTGTCGGTG GAAACCGAGC GTGTGCGCGA AGCCGCACCG
CTGCCGTTCG ACCTCGGCAC CTTGCAGGAA GTGTGTTCGC GGCAACTCGG GCTGGACGTA
CAGGAGACGC TGGACATCGC GCAGTCCTTG TACGAAACGC ACAAGGCGAC GACTTATCCG
CGCAGTGACT CCGGCTACCT GCCCGAGAGC ATGCTGGCCG AAGTGCCGAC CGTGCTCGAC
GCGCTGCTCG CCACCGATCC CGGCCTACGC CCGTTGATCG ACCGGCTCGA CAGGACACAG
CGCTCGCGCG TCTGGAACGA CAGCAAGATA ACGGCGCACC ACGGCATCAT TCCCACGCTG
GAGCCTGCGA ACCTCTCGGC CATGTCGGAG AAGGAGCTGG CGGTATACGC GCTGATCCGG
GCGCACTACC TGGCGCAGTT CCTGCCGCAT CACGAATTCG ACCGCACACT GGTGATGCTC
GACTGTGCAG GGCAATCGTT ACAGGCCGTC GGCAAACGGG TGATCGTGCC TGGCTGGCAC
CTGGCGCTCC CCGGCAAGGG GCAGGATGCG GCGGACGACG AGCCGGCCCA GCGCAGCCAG
ATCCTGCCGC CGCTGGACAC CGGAGCGCGC TGCGGTGTCC AGCAGGTCGA ACTGAAGGCA
CTGAAGACGC TGCCCCCCAA GCCTTACACC CAGGGCGAAT TGATCAAGGC GATGAAGGGT
GTCGCCAAGC TGGTCACCGA TCCACGGCTG AAGCAGAAGC TGAAGGAGAC GACGGGCATC
GGCACCGAAG CCACGCGCGC CGGCATCATC AACGGCCTGT TGGCTCGCGG CTATCTGGTG
AAGAAGGGTC GCGCCATCCG CGCGTCGGAT GCTGCCTTCA CACTCATCGA CGCGGTGCCG
GCGGCGATCA CCGATCCCGG CACGACGGCG ATCTGGGAAC AGGCGCTGGA CATGATCGAG
GCCGGCCAGA TGACGCTGGA CACCTTCATC AACAAGCAAT CGGCCTGGGT CGCGCAGTTG
GTTCAGCAAT ATCGAGGCAC CGTCCTGTCG ATCAAGCTGC CCGAAGGGCC GGCCTGCCCG
GTATGCGGTG CGGCGACGCG CCAGCGCAAC GGCAAGAACG GTGCCTTCTG GTCGTGCAGC
CGCTATCCCG ACTGCAAGGG CACGCTGCCG GCCGAATCCT CGACGGGCAG GCGCAGGGCT
TCGCGCCAGC GGCGCGCTGC GCCCAAGGCA TCCTGA
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| Protein sequence | MRVFLCEKPS QGKDIARVLG ARQRGNGCYS GSGITVTWCI GHLVEAAPPE TYGEQYKQWS
IEQLPILPER WRIEVKAKTA AQFKIVKQFV AQAGELVIAT DADREGEMIA REIIDLCGYR
GPIQRLWLSA LNDASIRKAL TQLKPGGETL PLYFSALARS RADWLIGMNL SRLFTVLGRR
SGYQGVLSVG RVQTPTLKLV VDRDREIARF VSVPYWTIDV TLSHAGQSFA ASWMPPDGTT
DAAGRCLQQP VAQQAADRIR AGRESKVLSV ETERVREAAP LPFDLGTLQE VCSRQLGLDV
QETLDIAQSL YETHKATTYP RSDSGYLPES MLAEVPTVLD ALLATDPGLR PLIDRLDRTQ
RSRVWNDSKI TAHHGIIPTL EPANLSAMSE KELAVYALIR AHYLAQFLPH HEFDRTLVML
DCAGQSLQAV GKRVIVPGWH LALPGKGQDA ADDEPAQRSQ ILPPLDTGAR CGVQQVELKA
LKTLPPKPYT QGELIKAMKG VAKLVTDPRL KQKLKETTGI GTEATRAGII NGLLARGYLV
KKGRAIRASD AAFTLIDAVP AAITDPGTTA IWEQALDMIE AGQMTLDTFI NKQSAWVAQL
VQQYRGTVLS IKLPEGPACP VCGAATRQRN GKNGAFWSCS RYPDCKGTLP AESSTGRRRA
SRQRRAAPKA S
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