| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2817 |
|---|
| Symbol | |
|---|
| ID | 7315254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 2960386 |
|---|
| End bp | 2961591 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643617717 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002514877 |
|---|
| Protein GI | 220935978 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.707802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATCG ACAAGCCTCA TCGGGGAGGC GGTCCGGTCT CGCTCTCCGC CCTGCTGGAT
GAGGCCGCTC AACGCTTGCC GCCCCGACAG GCCGGGCCGA CGGCCAGCGA TGGATTCCTG
TTCAGCGGCA ACCGCCATGA GAGCGTGCCG CGCGCGCTGT TCTTCGATCA TCGCCTCACG
CCACTGGAAC GCAACGCCTG GCAGGTGTTC CGGCTGCTGC TCGACGACGA CGGCATCACC
GCCTTTCCCA CCTACGAACA ACTCCGCCCC TACCTTGCCT CGACGCCGTG CGCGCCGAAG
GCCTCCCACG AGACGGTGGC GCGCGCGCTC ACGCTGCTGC GCCTGACGCG CTGGCTCAGT
CTGGTGCGGC GTCGGCGCGA TCCGCGCACC GGGCGCATCC AGGGCAACCT GTACGTGCTG
CACGATGAGC CGCTGACGCC CTTCGAGGCC ATGCAGCTCG ATCCCGACTA CCTGGACCTG
GTAAGCCAGG CGCTGACCCA TGCGAGCAAG GCGGTGCAGC ACGTCGGCGT CCACACACTT
CAGGAAGTCG CTGAAGACCC ACTGCTCAAC GGCCGCGCCC TGCCCACGCG CCTGCAGGTG
CTGGCGCAGC GGTTGGCAAG CCAGGAGTGG AACCCACTCG AAAGTTATCC ACAGGACGCG
ACGATTCACG AAACCGAAGA AGGCCCGAAA GCCCTTCTTC GGCACAGAGA ACAGCAGCCT
TCGGAATCCG AAGCGGGTCG CAAAGCCCCG TCAGACGCCC TTCTTCGGAA TCCGAAGCAG
GACCGTACTG TACGTAAAGA AAGTATTAAA AATAATAAAA TACGTACAGT ACCGCGCGCG
CGAGAAAACC TTCGTCTGCC TCATCGCTTT CTCGCCTTGA AGGAGGAACA GCAGTCCGGC
GCACTAGTCG CACTTCAGCG GGTGGACGAC ACCCTGCAAC AGGCGGTGCT CGACGAATGG
GCGGCCCGCT GCCAGGCCGG CGGCATCCGC AATCCCGCAG GTTATCTCTT CGGGGTCATC
CAGAAAGCGA TCAAGGGCGA GTTCCATGCC TGGGCTGGTC AGCCGGAACA CGCACCGACT
GCTATTTCAC CGTCGTCTCT GGAATCGCTG CGCGCGCCCG AGCGCGACTG GTCTCCGCCA
GCGATCGATC ACGAAGCCGC GCAGCAGCAT CTGACCCGCC TGCACGACCT GTTCAAGGAG
TCTTGA
|
|---|
| Protein sequence | MEIDKPHRGG GPVSLSALLD EAAQRLPPRQ AGPTASDGFL FSGNRHESVP RALFFDHRLT
PLERNAWQVF RLLLDDDGIT AFPTYEQLRP YLASTPCAPK ASHETVARAL TLLRLTRWLS
LVRRRRDPRT GRIQGNLYVL HDEPLTPFEA MQLDPDYLDL VSQALTHASK AVQHVGVHTL
QEVAEDPLLN GRALPTRLQV LAQRLASQEW NPLESYPQDA TIHETEEGPK ALLRHREQQP
SESEAGRKAP SDALLRNPKQ DRTVRKESIK NNKIRTVPRA RENLRLPHRF LALKEEQQSG
ALVALQRVDD TLQQAVLDEW AARCQAGGIR NPAGYLFGVI QKAIKGEFHA WAGQPEHAPT
AISPSSLESL RAPERDWSPP AIDHEAAQQH LTRLHDLFKE S
|
|---|
| |