| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2784 |
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| Symbol | |
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| ID | 7317300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2925347 |
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| End bp | 2926366 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643617684 |
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| Product | putative porin |
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| Protein accession | YP_002514845 |
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| Protein GI | 220935946 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000063685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGC AAGTGCTCGT GGTGGCCGTG GCCGCTGCCC TCGCTGTGCC CGCCGTGGCC
ATGGCCGATG CCAGCATCTA CGGCCGTGCC CATGTGTCCT TTGACTACCT GGATAACGAT
GGCGACTACA GCGCCACCAA CGTCTCCAAC AACTCCAGCC GCGTCGGCGT GCGCGGTTCC
CAGCAGCTGA CCGACGATCT GAAGGGTTTC TTCCAGGTCG AGTCCAACTT CGAGGCCGCT
GGTGATTCCA ACAACGGTCG TCTGGGCACC CGCAACACCT TCGTGGGTCT GGAAGGCGGC
TTCGGTCGCA TTCGCGCCGG TTACAGCGAC ACCGTCACCA AGGGCATCAG CCGCGCCACC
GATCTGTTCG GTGACCAGGC CGGTGACTCC CGCAACATGC TCAACGGCAT CGGTGACCAG
CGCTTCCGCA ATGCCCTGTT CTACACCAGC CCGAAGCTGG GCCCCGTCAC CGTGAGCGTT
GAGTACTCCA CCAACGACAA CACCAACAGC ACCGCTGCCG ACAGCAACGA CGACCAGGCC
TACAGCCTGG GTGCCGTCTA CCGCGAAGGC CCCCTGTACA TCGGTCTGGG CTACGAGGCC
CGTGATTTCG CCAACGGCAC CGACAACAAG GCCACCCGTC TGGGTGCCTA CTACGACATG
GACGCCTTCC GCTTCACCGG TCTGTACCAG GCCGCCACCG ACGCCGCCGA CAACGACCTG
AACACCTTCG GTCTGGGCGT GCGCTACACC ATGGGCAAGA CCCAGCTGAA GGCCCAGTAC
TACTGGACCG ACAACGACGG CACCGATGCT GATGCCGCCA TGCTGGCCCT GGGTGTGCAG
TACAACCTGA CCCGCCAGAC CAGCTTCTAC GCCGCCTATG CCATGACCGA CAATGATGAC
ACTGCCACCT ATCGTCCCGC TGGCGGCGGC CATGGTGACA ACATCCCCGG CGTGGTGGGT
GGTTCCTCCC CCTCCATCAT CAGCTTCGGC GTGATGCACA ACTTCAAGTT CGATTTCTGA
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| Protein sequence | MKKQVLVVAV AAALAVPAVA MADASIYGRA HVSFDYLDND GDYSATNVSN NSSRVGVRGS
QQLTDDLKGF FQVESNFEAA GDSNNGRLGT RNTFVGLEGG FGRIRAGYSD TVTKGISRAT
DLFGDQAGDS RNMLNGIGDQ RFRNALFYTS PKLGPVTVSV EYSTNDNTNS TAADSNDDQA
YSLGAVYREG PLYIGLGYEA RDFANGTDNK ATRLGAYYDM DAFRFTGLYQ AATDAADNDL
NTFGLGVRYT MGKTQLKAQY YWTDNDGTDA DAAMLALGVQ YNLTRQTSFY AAYAMTDNDD
TATYRPAGGG HGDNIPGVVG GSSPSIISFG VMHNFKFDF
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