| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2743 |
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| Symbol | |
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| ID | 7316905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2883968 |
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| End bp | 2885044 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643617643 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002514804 |
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| Protein GI | 220935905 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.125422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCCT TCTTCGCCCG AAACCGTTCC GCCCTCACCA TCGCCGGTGT CGCACTGCTG
CTGACGCTGT GGATCCTGAG CGGGGTGCTC ACCCGCGAGC CGCCGCAGAT CAATCAGCGC
GCCGAGGCGC AGCCCATGAC CGTGGCGGTG ATGCGCAGCG CGGCGCAGAC CGTGGAGCGC
CTGCTCACGC TCCAGGGGGA GGTGCAGGCG GACCAGCGGG TGACGGTGCG CGCGGAGACG
GCGGGGCGCA TCGCGGCCCT GCCGGTGGAG CTGGGGCAGC GGGTGAGCGC GGGCGAGGTG
ATCGCGCGCA TCAGCATGGA CGATCGGGAC GCGCGGCTGC GCCGGGCCGA GGCGGCGGTC
AGGGGACGGG AGACCGATTA CCGCGCCGCC CAGCAACTGG CGCGGGAGGG CTTTCAGGCG
CAGCTGCGGG TGGAGACGGC GCTGGCGGAG CTGGAGGCGG CCCGGGCGGA ACTGGAAGCC
GTGCGCCTGG ACATCGCCAA CACGCATATC CGCGCGCCCA TCGCCGGGGT GGTCAATCAT
CGCTACGCGG AGGTGGGCGA CTTCGTCGGC CGTGCCGACC CGGTGGCCGA GGTGCTGGAG
AACCATCCCC TGCGCGCGGT GGTGCAGGTG CCCCAGCACA ACGTGCATCG GGTGCAGGTG
GGCGGTCCGG CCCACGTGAG CTTCGTGGAC GGCAGCGAGC ACACCGGCAC GGTGCGCTAC
ATCTCGGCTC GGGCGGACAC CACCACGCGC ACCTTCCGGG TGGAGATCAC CGTGCCCAAC
GAAGAGCGTT CGCTGCCCTC GGGGGTGAGC GTGCAGGTGC GCATCCCGGT GGAGCAGGTG
ATGGCCCAGC GCATCTCGCC GGCCCTGATC GGTCTGGACG ACCGGGGGCG CCTGGGGGTG
AAGACCGTGG ATGACGACGA CCGCGTGGCC TTCCACGTGG TGGACGTGGT GCGCGCCGAT
GCCGACGGTG TCTGGGTCAC CGGTCTGCCG GAGGCTGCGC GCATCATCAC CATCGGCCAG
GGCTTCGTGA ATGCGGGCGA GCCCGTGCGG GTGGTGGACG AAGGCGCCGG TTCATGA
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| Protein sequence | MSSFFARNRS ALTIAGVALL LTLWILSGVL TREPPQINQR AEAQPMTVAV MRSAAQTVER
LLTLQGEVQA DQRVTVRAET AGRIAALPVE LGQRVSAGEV IARISMDDRD ARLRRAEAAV
RGRETDYRAA QQLAREGFQA QLRVETALAE LEAARAELEA VRLDIANTHI RAPIAGVVNH
RYAEVGDFVG RADPVAEVLE NHPLRAVVQV PQHNVHRVQV GGPAHVSFVD GSEHTGTVRY
ISARADTTTR TFRVEITVPN EERSLPSGVS VQVRIPVEQV MAQRISPALI GLDDRGRLGV
KTVDDDDRVA FHVVDVVRAD ADGVWVTGLP EAARIITIGQ GFVNAGEPVR VVDEGAGS
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