| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2681 |
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| Symbol | |
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| ID | 7315400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2824146 |
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| End bp | 2826734 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643617582 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002514743 |
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| Protein GI | 220935844 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC AGTCCCAGCC CCTGGACCTG ATGTCCCGCT ACGACACCCT GAACGAAGGT
GTCCTGCGGG CCGTCCTGGA GGAGATGGTG GACGGCGTGG TGCTCATCAA CCGCCTGGGC
ATCATCCGCG AGGTGAACCC GGCGGTGACG CGCATCTTCG GCTATGAACG CAAGGAGATG
CTGGGTGCCA ACGTCAGTCT GCTCGTGCCC TCGCCGGACC GGGAGCGCCA CGACCAGTAT
CTGCGCAACT ACCTGCAGAC CGGCGAGGGC CGCATCATCG GCGTGGGCCG CACGGTCCAC
GGTCAGCGCA AGGACGGCAG CCTGTTCCCC ATGGAGCTGG CCGTGAGCGA GGTCAAGGCC
GGTGGCGAGC ACCTGTTTGC CGGGATCGTG CGGGACATCA GCGAGCGCCA CCAGTTTCAC
CAGACCCTGG CCCTGTTCCG CAGGGCCATG GACAGTGCCT ACAACGGCAT CGCCATCGCA
GACGTGGACG CCGAGGGCGA GCGCATCAGC TACGCCAATG CCGCCTTCGC CCAGATCACC
GGCATCCCGG CGGTGGACCT GCTCGGACGG AGCCTGACCC TGCTGGCCTG CGAGGGCGAG
GACGGGCAGA CCTGCACGGC GATGGTCTCA CAGATGCGCA CCGGTGGTTC GATGCGCAGG
ACCCTGCGCT GCCAGCGCCC GGACGGCAGC CTGTTCTGGA ACGATGTCAC CCTCTCGCCC
ATCTTCAACG AGCGCGGCGA GATCAGCCAG TGCATCGCCG TGCTTGCCGA TGCCACGGCG
CTCAAGGAGA GCGAACAGGC CCTGCGCCGC AGCCGGGACG CCCTGGAACG GCAGGTGGAG
GCGCGCACCG AAAACCTCAC CGAGGTGGTC AGGCAGTTGC GCCGGGAGAT CGAGGAACGC
ACCCGGGTGG AGTCCGCCCT GCGCCTGAGC GAGCAGCGCC TGGCCAACGC CCAGCGCATC
GCGCGCCTCG GCCACTGGGA ATGGGAGATC GCCACCGGCC GGCTGTACTG GTCCGCCGAG
GTCTACAACC TCCTGGGCCT GGGCCCGGAA TTCACCACGC CGGACTACGA GCGTTTCCTG
GAGATGATCC CCGGGGACGA CCGGCAGCGG CTGCAGGAGG CCATCGCCCG CTGCCTCGAG
CACGGCCTGC CCTACGAGAT CGACCATCGC ATCACCTGCC CGGACGGCAG CGAGCGCATC
CTCCACGAGG ACGGCGAGCT GGTCTACGAC GACGAGGGCA AACCCCTGCT GTTGCGCGGT
ACCGCCCAGG ACATCACCGA ACGCCACGAC TACCAGAACC GGCTCAGGCA CCTGGCCAAC
TTCGACCCGG TCACCGGGCT GCCCAACCGC ACCCTGTTCA AGGACCGCCT GCAGCACGCC
CTGGCCAACG CGACGCGCAA CCAGCGCCTG GTGGCCCTGC TGTTCCTGGA CATGGACCAG
TTCAAGAACG TCAACGACAG CCTGGGCCAC ATGATGGGCG ACGAGTTGTT GCGCCAGACC
GCGGAGAGGC TGCTGGGCTG CGTGCGCGAG GGCGACACCG TGGCCCGATT CGGCGGCGAC
GAGTTCATCA TCCTCCTGGA GAACATCGAG CACAGCGAAC AGGCGAGCCT GTCCGCCGAG
CGCGTGGTGC AGGCCATGCG CCGCCCCTTC CGCCTGGGCG AGCACGAGCA TTTCTGCAAC
GTGAGCATCG GCATCAGCCT GTACCCGGAA GACGACGAGC ACCCGGAGGA CCTGGTGCGC
CACGCCGACA GCGCCATGTA CCTGGCCAAG GCCCAGGGTG GCGCCGGCTA CCGCTTCTAC
ACCCCGGACA TGAACACCCG GGCCATGGAG CGCCTGCTGT TGCAGAACCA GCTGCACCAG
GCCCTGGAAC TGGGCCAGTT CCAGGTCCAC TACCAGCCCC AGATGGACCT GCGCAGCGGA
CGCATCTGCG GTGTCGAGGC CCTGGTGCGC TGGCAGCACC CGGAGCGGGG CCTGGTCCCG
CCCGCGGAAT TCATTCCGAT GGCCGAGGAC ACGGGCCTCA TCGAGCCCCT GGGGGAATGG
GTGCTGCGCA CCGCGGCGCG GGAGGTGCGC GGCTGGCAGG ACCGGGGGCT GCCGGCCCTC
AACCTGAGCG TGAACCTCTC TCCCCGCCAG TTCCGTCACC CGGACCTGCC GGGCATGGTG
GAGCGCGTGC TGGCGGAATC GGGGCTGGAG GCGGAGCGTC TGGAGCTGGA GATCACCGAG
CGGCTGATCA TCGTGGACCT GGAACACACC GTGGACACCC TCAGCCGCAT CGCCCGACTG
GGCGTGCGGG TGTCCATCGA CGACTTCGGT ACCGGGCATT CCTCCCTCGC CTACCTCAAG
CGCCTGCCCG TGCACGCGCT CAAGATCGAC CGGGAATTCG TCGACGGTAT CGGCCAGGAC
AGTGACGATG CCGCCATCGC CGAGGCGGTG ATCGCCCTGG GCCGCACCCT GCGACTTCAG
GTGATCGCCG AGGGGGTGGA GACCCGGGAA CAGGCCAGCT TCCTGCGCGA ACACGGCTGC
GATGCGGTCC AGGGATTCTT CATCGCCCGG CCCATGCCTG CTGGGGAACT GACGGGCTGG
CTCAGCTGA
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| Protein sequence | MTDQSQPLDL MSRYDTLNEG VLRAVLEEMV DGVVLINRLG IIREVNPAVT RIFGYERKEM
LGANVSLLVP SPDRERHDQY LRNYLQTGEG RIIGVGRTVH GQRKDGSLFP MELAVSEVKA
GGEHLFAGIV RDISERHQFH QTLALFRRAM DSAYNGIAIA DVDAEGERIS YANAAFAQIT
GIPAVDLLGR SLTLLACEGE DGQTCTAMVS QMRTGGSMRR TLRCQRPDGS LFWNDVTLSP
IFNERGEISQ CIAVLADATA LKESEQALRR SRDALERQVE ARTENLTEVV RQLRREIEER
TRVESALRLS EQRLANAQRI ARLGHWEWEI ATGRLYWSAE VYNLLGLGPE FTTPDYERFL
EMIPGDDRQR LQEAIARCLE HGLPYEIDHR ITCPDGSERI LHEDGELVYD DEGKPLLLRG
TAQDITERHD YQNRLRHLAN FDPVTGLPNR TLFKDRLQHA LANATRNQRL VALLFLDMDQ
FKNVNDSLGH MMGDELLRQT AERLLGCVRE GDTVARFGGD EFIILLENIE HSEQASLSAE
RVVQAMRRPF RLGEHEHFCN VSIGISLYPE DDEHPEDLVR HADSAMYLAK AQGGAGYRFY
TPDMNTRAME RLLLQNQLHQ ALELGQFQVH YQPQMDLRSG RICGVEALVR WQHPERGLVP
PAEFIPMAED TGLIEPLGEW VLRTAAREVR GWQDRGLPAL NLSVNLSPRQ FRHPDLPGMV
ERVLAESGLE AERLELEITE RLIIVDLEHT VDTLSRIARL GVRVSIDDFG TGHSSLAYLK
RLPVHALKID REFVDGIGQD SDDAAIAEAV IALGRTLRLQ VIAEGVETRE QASFLREHGC
DAVQGFFIAR PMPAGELTGW LS
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