| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2673 |
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| Symbol | |
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| ID | 7315392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2813174 |
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| End bp | 2816587 |
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| Gene Length | 3414 bp |
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| Protein Length | 1137 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643617574 |
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| Product | Ribonucleoside-diphosphate reductase |
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| Protein accession | YP_002514735 |
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| Protein GI | 220935836 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region
[TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA CCGGTGATCC AGGCAACGGG CCGCCGTCGC TGCCCCTGCA GCCGGCGGCC
CGGGACGTCT GGGACCGCAA ATACCGGCTG CGGGATGCCA CCGGCCGTCC CCTGGAGGAC
ACGCCTGCCG AGACCCTGGC CCGGGTCGCC CGGGCCCTGG CCGACGTGGA GGCCACCCCG
GCGCTGCGCG AACACTGGCG CGAACGCTTC CTCTGGGCCC TCAACCACGG CGCACTGCCC
GCCGGGCGCA TCCTGGCCAA CGCCGGGGCC CGGGATCACA AGCGCGGCAC CTCCACCATC
AACTGCACCG TCTCCGGCAC GATCCACGAC ACTCTGGACG AGATCCTCGG CAAGCTGCGC
GAGGCGGGCC TGACCCTGCA GAGCGGCGCG GGCATCGGCT ACGAGTTCTC CACCCTGAGG
CCCAAGGGCG CCTGGGTGGC GGGCGCCGGG GCGCGCAGTT CCGGCCCGCT GTCCTTCATG
GACGTCTACG ACCAGATGTG CCGCACCATC GCCTCGGCCG GCGACCGGCG CGGTGCCCAG
ATGGCCACCT TCCACATCGG CCACCCGGAC GTGCTGGAAT TCATCGAGGC CAAGCGCGAG
CCCGGGCGGC TGCGCCAGTT CAACCTCTCC CTGCTGGTGC CCGACGCCTT CATGGCGGCC
CTGGATGCGG GCGCCGACTG GCCCCTGGCC TTCCCCCTGA GCCCCGCCGA GCAGGCGCGC
ACCGGCGCGG ACCTGCAGGA TCCGAAGCAG GTGGTCTGGC GCCACTGGCC CGAGACCGAG
GGTTACATCA CCGACGGCCA CGGCCGCGTC GCCTGCCGGG TGCAGCAGTG GATACCGGCG
GCGGCGCTGT GGGAGCAGGT GATGCGCGCC ACCTACGACC ATGCCGAGCC CGGCGTGATC
TTCATCGACC GGGTGAATGC CGAGAACAAC AACGGTTTCT GCGAATCGAT CCGCGCGGCT
AATCCCTGCG TAACAGCGGA CACTTGGGTA CAAACGGACC AGGGGCCGCG CCAGGTAAGA
ACGCTGGTTG ATAGGGCATT TAATGCTCGA TTGGATGGTA ACGATCATCC AAGTGGGAGT
GAGGGATTTT TTTTCACCGG CGTCAGGCCT GTCGTCATAG TGAGGACTGG TGAGGGTCAC
GCATTGCGTT TGACCGAGGA CCATCGTGTG CGTCGCGTCA TCCGGTTCAC GCGTCATACA
CAAGAGACTG ATTGGTGTTC TGCAGGGGAA TTACATCCAG GCGATTTGAT TCAACTCAAT
GATCATCGGG CCAATGCGCA ATGGCATGGG AATTTCACAG CATCACAGGG CTATCTGCTT
GGCCTCTTAG TGGGTGATGG GACGCTGAAG TCAGATGCGG CGGTTCTATC GGTATGGGCA
GGGTCGTCCA AGGCTGACGA TGCCGGTGAT GGGACAATAT CGTCCGGCGT TAAGGCAATC
ATGCGCAAGG CTGAACAGGC TGTCCGTGGC CAAAAGCATC GTAGCGATTT CGCCGGCTGG
AGTAAGGTAG CCGGACGTGG TGAGTACCGT CTGAAGTGCG TCGCTTTGCG CGATTTGGCG
TTCGAGGTTG GTATGCGCCC GGGCAACAAG CCAATCACGC CGGCCATAGA GTGTGGTTCC
AGCGAATTTT GCCGATCCTT CCTGAGAGGT TTTTATGACG CGGACGGATC GGTGCAGGGT
TCTCAGATCA AGGGTGTCAG TGTTCGTTTG GCGCAGTCGG ATATCGCTCG TCTTGAGGCC
GTTCAGCGCA TGCTGCTAAG GCTCGGTATT GCCTCCAAGC TTTACAGGAA TCGCCGAATC
GAGAGGGAGT GCTATTTGCC CGATGGAAAG GGGGGTGAGA AAGCCTATAC AACGCGAGCC
CAGCATGAAC TGATCATCAG TGGCGAGAAT ATTCTACGTT TTGCAGAGTT TGTCGGTTTT
GGAGACACCG ACAAGCAGGC TAGCCTGGAG AGGTTGATAC AGGCCTACCG GCGTAGACCC
AACCGTGAGC GTTTTGTCGC TCGTGTGGCG TCGGTTACGG TTGATGGGGA AGAACCCGTT
TACGATGTTC GAATACCGGG CATCAACGCC TTTGATGCCA ACGGATTCCA TACGCATAAC
TGTGGCGAGC AGATGCTCCC GCCCTACGGC GCCTGCCTGC TGGGTTCCGT GGACCTGACC
CGTTTCGTGC AGCATCCCTT CACCGGCAAG CTGCGCTTCG ACTGGGACAC CTACCGGGAG
GTGGTGGCGG TGTTCACCCG CATGCTGGAC AACGTGGTGG AGATCCACGG CCTGCCCCTG
GCGCAGCAGG CCGAGGCCCT GGAGCGCACC CGGCGCCACG GCATGGGTTT CCTCGGTCTG
GGGTCGGCGC TTGCCATGAT GGGTATCCGC TACGACAGCC CCGAGGCGGC GGCCTTCACC
GAGCGGGCCG CCCGGGAACT GGCGCTCACC GGCTGGCGCA CGGGCCTTGA ACTGGCGAGG
GAAAAGGGGC CGGCGCCGCT CATGTACGAG CGCTTCACCG TCACCGAGCA CCTGCTGGCC
CGCTATCCCG CCCTTGCCGA GGACGGCATC CGGGTGGGCG ACGTGCTGCC CGGCCGGGTG
CTGCATGCCC GCTACAGCCC CTACATGCGC CGCATCGCGG GCCTCGATCC GGCCCTGGTG
GCCGCGCTGG CCGAGGAGGG CGCCCGCTTC ACCCACCACA GCGCCATCGC CCCCACCGGC
ACCATCGCCC TGTCCTTCGG CAACAACGTC AGCAACGGCA TTGAACCGAG CTTCGCCCAC
ACCTACCTGC GCAACATCCT GGGCCGGGAC GGCGCCACCC GGGACACGGT GCCCGTGACC
GCCTACGAGC TGCTGGCCTG GCGCGCCCTG GTGGACCCGG ACGCCGACCC GGAGGCGAAG
CAGGGTCCCC ACCGCCTGCC CGAGGCCTTC GTCACCGCCG GCGACATCGC CCCCCGCGCC
CATCTCGCCA TCCAGGCCGC CGCCCAGCCC TGGATCGACG CGGCCATCTC CAAGACCATC
AACGTGCCCA CCGACTGCCC CTTCGAGGAC TTCCGCGACC TGTACCGGGA GGCCCATGCC
CTGGGTCTCA AGGGCTGCAC CACCTATCGT CTGAACCCCG CCGCCTTCCA GGGCGTGCTG
CTGCGCCCGG AGGACCTGGC CCACAGCCGC TACCGTTTCA TCCTGCGTGA CGGCCGCTGC
CTGAGTCTTG CCGGCGACCG CTGGGTGCGT TACGGCGAGC ACCGCGAGCT GGCCGCGAAC
CTCTACGGAC AACTGCGCGA ACGGGGCATC CGCGAAACAG GCGGGGAATT GCCGGCGCTT
TCGCCCGAGT GCATCGATCC GCCCGGGGAT CCACTGGAGA TCAACGTACT GGTGGTGGAG
GTGGCCTGCG AGACGCCCCA CGGGGTGTCG CCGGTGTGTC CGGTGTGTGA ATGA
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| Protein sequence | MSQTGDPGNG PPSLPLQPAA RDVWDRKYRL RDATGRPLED TPAETLARVA RALADVEATP
ALREHWRERF LWALNHGALP AGRILANAGA RDHKRGTSTI NCTVSGTIHD TLDEILGKLR
EAGLTLQSGA GIGYEFSTLR PKGAWVAGAG ARSSGPLSFM DVYDQMCRTI ASAGDRRGAQ
MATFHIGHPD VLEFIEAKRE PGRLRQFNLS LLVPDAFMAA LDAGADWPLA FPLSPAEQAR
TGADLQDPKQ VVWRHWPETE GYITDGHGRV ACRVQQWIPA AALWEQVMRA TYDHAEPGVI
FIDRVNAENN NGFCESIRAA NPCVTADTWV QTDQGPRQVR TLVDRAFNAR LDGNDHPSGS
EGFFFTGVRP VVIVRTGEGH ALRLTEDHRV RRVIRFTRHT QETDWCSAGE LHPGDLIQLN
DHRANAQWHG NFTASQGYLL GLLVGDGTLK SDAAVLSVWA GSSKADDAGD GTISSGVKAI
MRKAEQAVRG QKHRSDFAGW SKVAGRGEYR LKCVALRDLA FEVGMRPGNK PITPAIECGS
SEFCRSFLRG FYDADGSVQG SQIKGVSVRL AQSDIARLEA VQRMLLRLGI ASKLYRNRRI
ERECYLPDGK GGEKAYTTRA QHELIISGEN ILRFAEFVGF GDTDKQASLE RLIQAYRRRP
NRERFVARVA SVTVDGEEPV YDVRIPGINA FDANGFHTHN CGEQMLPPYG ACLLGSVDLT
RFVQHPFTGK LRFDWDTYRE VVAVFTRMLD NVVEIHGLPL AQQAEALERT RRHGMGFLGL
GSALAMMGIR YDSPEAAAFT ERAARELALT GWRTGLELAR EKGPAPLMYE RFTVTEHLLA
RYPALAEDGI RVGDVLPGRV LHARYSPYMR RIAGLDPALV AALAEEGARF THHSAIAPTG
TIALSFGNNV SNGIEPSFAH TYLRNILGRD GATRDTVPVT AYELLAWRAL VDPDADPEAK
QGPHRLPEAF VTAGDIAPRA HLAIQAAAQP WIDAAISKTI NVPTDCPFED FRDLYREAHA
LGLKGCTTYR LNPAAFQGVL LRPEDLAHSR YRFILRDGRC LSLAGDRWVR YGEHRELAAN
LYGQLRERGI RETGGELPAL SPECIDPPGD PLEINVLVVE VACETPHGVS PVCPVCE
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