| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2657 |
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| Symbol | |
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| ID | 7315376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2800510 |
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| End bp | 2801517 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643617558 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_002514719 |
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| Protein GI | 220935820 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCA CCTGGCCCGC CGGTCTGCCC TTCTTCCAGG CCGGCCCCGG CAGCGCCACC
GACTTCGCCC GCCGGGTGGA GGAGATGTCC AACGGCCGCA TCCGCATCCG CGTGTACTCC
GCCGGTGAGC TGGTACCCGC CTTCGAGGGC TTCGATGCCG CCTCCGCCGG CCGCCAGGTG
CAGCTCAACC ACGGCTGCGC CTACTACTGG GCCAACAAGT CCTTCGCCGC CCAGTACTTC
ACCACCGTGC CCTTCGGCAT GACCTTCCAG GGCCACAACG CCTGGCTCAA CGAGGGCGGC
GGCTACGAGC TGTATGAAGA GGTGTACCGT CCCTTCAACC TGGTGCCCCT GGTGGTGGGC
TGCACCGGCG TGCAGCCGGT GGGCTGGTTC CGCCGCCCGG TGGAGAGCCT GGCCGACTTC
CGCGGCCTGA ACATCCGCAT GCCCGGCCTG GCCGGTGACA TCTACCGGGC CATCGGCGCC
AACCCCCGCC TGCTGCCCGG TGGTGAGCTG TTCGCCGCCC TGGAGCGTGG TGCCATCGAC
GCCGTGGAAT GGGTGGGCCC CTACTCCGAC CGTGAGCTGG GTCTGCACAA CGCCGCCAAG
AACTACTACT CCTCCGGCTG GCACGAGCCC GCCACCAGCA CCGAGGTGGT GGTCAACCGG
GCCGCCTGGG ACTCCCTGCC CAACGACCTC AAGGCCATCA TGCGCAACTG CGCCGCGGCC
TGTAACATCA CCTCCCACAC CACCCTGGAG GCCCGCAACG CGGACGCCCT GGACGACCTC
ATCAACAACC ATGGCGTGAA CTTCCGCCCG CTGCCCGATG ACGTCATCAA GGCCCTGCTG
GAGGCCACCA AGGACATCCT CACCACCCAG GCCAACCGGG ATCCGCTGGT GAAGAAGGTC
CACGAGAGCT ACTTCAAGTT CAAGGCCAAG CACGACCGCT GGCAGGCCAA CTCGGAGACC
ATGTTCCAGA CCCAGATCCG CGACCTGGGC CGGGAAATCC TGAGCTGA
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| Protein sequence | MTTTWPAGLP FFQAGPGSAT DFARRVEEMS NGRIRIRVYS AGELVPAFEG FDAASAGRQV
QLNHGCAYYW ANKSFAAQYF TTVPFGMTFQ GHNAWLNEGG GYELYEEVYR PFNLVPLVVG
CTGVQPVGWF RRPVESLADF RGLNIRMPGL AGDIYRAIGA NPRLLPGGEL FAALERGAID
AVEWVGPYSD RELGLHNAAK NYYSSGWHEP ATSTEVVVNR AAWDSLPNDL KAIMRNCAAA
CNITSHTTLE ARNADALDDL INNHGVNFRP LPDDVIKALL EATKDILTTQ ANRDPLVKKV
HESYFKFKAK HDRWQANSET MFQTQIRDLG REILS
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